Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4414 |
Symbol | |
ID | 4695096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4865349 |
End bp | 4866128 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639852163 |
Product | cephalosporin hydroxylase |
Protein accession | YP_999135 |
Protein GI | 121611328 |
COG category | [V] Defense mechanisms |
COG ID | [COG3510] Cephalosporin hydroxylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.244366 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCACC CCGACCCCTT GGCCCAGGAA CGCCGCGAGC GCCTGGCCGG CTATGCGCTG GACACCCCAT TCCAGGCCCT GTCGCGCCAC TGGGTGCGCG CCTCGATGCA GCGCCGGTAT GTCTACAACT TCGACTGGCT CGGGCGCCCC ATCATCCAGT ACCCGCAGGA CATGGTGGCG CTGCAAGCGC TGGTCTGGCG CCTGCGGCCG GACCTGATCA TCGAGACCGG CATCGCCCAT GGTGGCTCGC TGGTGCTCAG CGCCTCGCTA CTGGCCTTGC TGGACCTGAG CGATGCCATC GAGGCCGGCG ACATGCTCGA TCCACGCGCC TCCCGGCGCA AGGTGCTGGG TGTCGACATC GACATCCGCG CCCACAACCG CGCCGCCATC GAGGCCCACC CGATGGCCAG CCGCATTGCG ATGATCGAAG GCTCGTCGCT GGCGCCCGAG GTGGTGCAGC AGGTGCGCGC CTTTGCCCAG GGCTACCGGC GCGTGCTGCT GTGCCTGGAC TCCATGCACA CGCACGAGCA TGTGCTCGGC GAACTGAACG CCTATGCGCC GCTGGTCACG CCCGGCAGCT ACTGCGTGGT GTTCGACACC TTCATCGAGG ACCTGCCGCC CCGGTTCTTT CCCGACCGCC CCTGGGACCG GGGCAACAAC CCGAAGACCG CCGTTCGGCA ATGGCTGGCC GGGCAGACCG ACTTCGAGAT CGACGCCGAA ATGGAGCAGC GCCTGCAACT GACCGCCGCA CCGCAGGGAT TCCTGCGCCG CATGGGGTGA
|
Protein sequence | MSHPDPLAQE RRERLAGYAL DTPFQALSRH WVRASMQRRY VYNFDWLGRP IIQYPQDMVA LQALVWRLRP DLIIETGIAH GGSLVLSASL LALLDLSDAI EAGDMLDPRA SRRKVLGVDI DIRAHNRAAI EAHPMASRIA MIEGSSLAPE VVQQVRAFAQ GYRRVLLCLD SMHTHEHVLG ELNAYAPLVT PGSYCVVFDT FIEDLPPRFF PDRPWDRGNN PKTAVRQWLA GQTDFEIDAE MEQRLQLTAA PQGFLRRMG
|
| |