| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4372 |
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| Symbol | clpX |
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| ID | 4694419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4820600 |
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| End bp | 4821943 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639852119 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_999093 |
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| Protein GI | 121611286 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.179336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCTGTT GGGCAGGGCG CCACTGTCAT TTGGTTATCA TCCCGACCAC TTTCCGTCAC
AAGCAAGGCA TTGCCCCCAT GGCCGAGATA AAAGGCGCCC CCAGCGAAAA ATCCCTTTAC
TGCTCTTTCT GCAGCAAAAG CCAGCATGAA GTGCGAAAGC TGATCGCTGG CCCGTCGGTC
TTTATCTGCG ACGAGTGCAT CGACCTGTGC AACGAGATCA TCCGCCATGA CTTGCCGGTG
GCTCATCCGG CGCGGGAAAT CCTCAATGGC CTGCCCACCC CGGCAGAGAT CAAGAACAAC
CTGGACAACT ATGTGATCGG CCAGGAGGAG GCCAAGCGCA CGCTGGCCGT GGCGGTGTAC
AACCACTACA AGCGCCTGCG CTACAAGGAA AAGGCGCGCA AGAACGATGT CGAGCTGTCC
AAGAGCAACA TCTTGCTGAT CGGCCCCACA GGCTCGGGCA AGACGCTGCT GGCGCAAACC
CTGGCCCGCA TGCTCGATGT GCCCTTCGTG ATGGCAGACG CCACGACGCT GACCGAGGCC
GGTTATGTGG GCGAAGATGT GGAGAACATC ATCCAGAAGC TGCTGCAAAG CTGCGGCTAC
AAAGTCGAAC CGGCCCAGCG CGGCATCGTC TACATCGACG AGATCGACAA GATCTCGCGC
AAGTCGGACA ACCCCAGCAT CACCCGCGAT GTATCGGGCG AGGGGGTGCA GCAGGCGTTG
CTCAAGCTCA TCGAAGGCAC CATGGTCAGC GTGCCGCCGC AGGGCGGGCG CAAGCACCCG
AACCAGGACT TCCTGCAAAT CGACACCAGC GACATCCTGT TCATTTGCGG AGGCGCGTTT
GCCGGGCTGG AAAAGGTCAT AGAAAACCGC ACCGAAGCCT CGGGCATCGG TTTCGGCGCC
TCGGTCAAAA GCAAAAAGCA GCGCTCGCTG ACCGATGTGT TTGCCGAGGT CGAACCGGAA
GACCTGATCA AGTTCGGCCT GATCCCCGAG TTGGTGGGCC GCATGCCGGT GGTGACGGCC
CTGGCCGAAC TGAGCGAGCA AGCGCTGATA CAGATCCTGA CCGAGCCGAG AAACGCGCTG
ATCAAGCAGT ACGGCAAGCT GTTGGCGATG GAAGGCGTGA ACCTGGAGAT TCGCCCGGCA
GCGATGCAGT CGATTGCCCG CAAGGCCCTG GCACGCAAGA CCGGCGCCCG CGGCCTGCGC
TCGATCCTGG AGCAATCGCT GATCGGCACC ATGTTCGACC TGCCCAACAC CAGCAATGTC
GAAAGGGTGG TGATCGACGA GTCCACCATC GAAGAAAACA AACCCCCGCT GCTCGTTTAC
CGCGAGACGG CCAGGAAAGC CTGA
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| Protein sequence | MSCWAGRHCH LVIIPTTFRH KQGIAPMAEI KGAPSEKSLY CSFCSKSQHE VRKLIAGPSV
FICDECIDLC NEIIRHDLPV AHPAREILNG LPTPAEIKNN LDNYVIGQEE AKRTLAVAVY
NHYKRLRYKE KARKNDVELS KSNILLIGPT GSGKTLLAQT LARMLDVPFV MADATTLTEA
GYVGEDVENI IQKLLQSCGY KVEPAQRGIV YIDEIDKISR KSDNPSITRD VSGEGVQQAL
LKLIEGTMVS VPPQGGRKHP NQDFLQIDTS DILFICGGAF AGLEKVIENR TEASGIGFGA
SVKSKKQRSL TDVFAEVEPE DLIKFGLIPE LVGRMPVVTA LAELSEQALI QILTEPRNAL
IKQYGKLLAM EGVNLEIRPA AMQSIARKAL ARKTGARGLR SILEQSLIGT MFDLPNTSNV
ERVVIDESTI EENKPPLLVY RETARKA
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