Gene Veis_4371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4371 
Symbol 
ID4693599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4819969 
End bp4820577 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content62% 
IMG OID639852118 
ProductATP-dependent Clp protease, proteolytic subunit ClpP 
Protein accessionYP_999092 
Protein GI121611285 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.307002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.681724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAT TGGAAACACA GGGCCTGGGG ATGATCCCCA TGGTCATCGA GCAGTCGGGC 
CGTGGCGAGC GGTCCTACGA CATCTACTCG CGCCTGCTCA AGGAGCGCGT GATTTTTCTG
GTCGGACCGG TCAATGACCA GACCGCCAAC CTGGTGGTGG CGCAGTTGCT GTTTCTCGAA
AGCGAGAACC CGGACAAGGA CATCTCGTTT TACATCAACT CCCCGGGCGG CTCGGTGAGC
GCGGGCATGG CGATCTTCGA CACCATGAAT TTCATCAAGC CCGATGTCTC GACCCTGTGC
ACCGGCATGG CGGCCAGCAT GGGCGCCTTC CTGCTGGCGG CCGGGGCCAA GGGCAAGCGT
TTTGCACTGC CCAACTCCAA GGTCATGATC CACCAGCCCC TGGGCGGCAT GCAGGGCCAG
GCGACCGAGA TCGAGATCCA CGCGCGCGAA ATCCTCAAGA CCCGCGAGCA GCTCAACAAG
ATACTGGCCG AGCGCACCGG CCAGCCGCTG GAGAAGATCC AGCGCGACAC CGAGCGCGAC
TATTTCCTGT CGGCCGACGA GTCGCGGGAA TACGGTCTGG TCGATCAGGT GATCCACCGA
CGATCCTGA
 
Protein sequence
MNALETQGLG MIPMVIEQSG RGERSYDIYS RLLKERVIFL VGPVNDQTAN LVVAQLLFLE 
SENPDKDISF YINSPGGSVS AGMAIFDTMN FIKPDVSTLC TGMAASMGAF LLAAGAKGKR
FALPNSKVMI HQPLGGMQGQ ATEIEIHARE ILKTREQLNK ILAERTGQPL EKIQRDTERD
YFLSADESRE YGLVDQVIHR RS