| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4351 |
|---|
| Symbol | |
|---|
| ID | 4695177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4794500 |
|---|
| End bp | 4795204 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639852096 |
|---|
| Product | succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| Protein accession | YP_999072 |
|---|
| Protein GI | 121611265 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.376905 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGC GCACATTCCA CATCTACCGC TACGACCCGG ACAAGGACGC CAAGCCCCGC
ATGCAGACCG TCGAGATCGG GCTCGACGGC CACGAACGCA TGCTGCTCGA CGCGCTGCTC
AAGCTCAAGC AGCAAGACCC CTCGCTGTCG TTTCGCCGCT CCTGCCGCGA GGGCGTCTGC
GGCTCGGACG CGATGAACAT CAACGGCAAG AACGGCCTGG CCTGCCTGAC CAACATGAAC
ACCCTGACCG GCGCGATCAC GCTCAAGCCG CTGCCCGGGC TGCCCGTGAT CCGCGACCTG
ATCGTGGACA TGACCCAGTT CTTCAAGCAA TACAACTCGG TCAAGCCCTA CCTGATCAAC
AACGGGCTGC TGCCCGAAAA AGAGCGCCTG CAAAGCCCGC AAGAGCGCGA CGAACTGGAC
GGCCTGTACG AATGCATCCT GTGCGCCAGT TGCTCGACCA GTTGCCCGAG CTTTTGGTGG
AACCCCGACA AATTCGTCGG CCCCGCCGGC CTGCTGCAAG CCTACCGCTT CATCGCCGAC
AGCCGCGACG ACGCCACCGG CGAACGGCTC GACGACCTGC AAGACCCGTA CCGCCTGTTT
CGCTGCCACA CCATCATGAA CTGCGTCGAC GTCTGCCCCA AGGGACTGAA CCCCACCAAG
GCCATAGGCA AGATCAAGGA ACTCATGGTG CGCCGCGCCA TCTGA
|
|---|
| Protein sequence | MQQRTFHIYR YDPDKDAKPR MQTVEIGLDG HERMLLDALL KLKQQDPSLS FRRSCREGVC
GSDAMNINGK NGLACLTNMN TLTGAITLKP LPGLPVIRDL IVDMTQFFKQ YNSVKPYLIN
NGLLPEKERL QSPQERDELD GLYECILCAS CSTSCPSFWW NPDKFVGPAG LLQAYRFIAD
SRDDATGERL DDLQDPYRLF RCHTIMNCVD VCPKGLNPTK AIGKIKELMV RRAI
|
|---|
| |