Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4320 |
Symbol | |
ID | 4693895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4759980 |
End bp | 4760723 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639852065 |
Product | GntR family transcriptional regulator |
Protein accession | YP_999041 |
Protein GI | 121611234 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.196319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGACA ACGAACAAGC CATCTACGAC ACATTGTCCC GCGCGCTGCT GGCGGGCATG CTGACACCGG GCGCGCCGCT GCGCGAACCG GCTCTGGCCA AGGTGTTTGG CATCAGCAGG GAACGCATCC GCAAGATCCT GCAGCGCCTT GGGACCAACC GGTTGATCGA ACTGGTGCCC AACCGTGGCG CCTTTGTCGC CTCCCCCGCG CAGGAGCAGG CGCACGGCAT CTACGAGGCC AGGCGCATCC TGGAAGGCGG CATCGTCGGC CACTTGGCTG CCAGTCCGGG GGCAGATACC GTCGAGCGGC TGCGGGAACA TATGGACAGG GAAAGCGCCG CACTGAAGAG CGGCGATCGT GCCGAGTCGG TGCGGCTGTC GATGCAGTTC CACATGATCC TGGCCGAAGC CACCGGCAAC TTCTTCATCG TCCGGCAGGT GCAGGAACTC GTCAGCCGCA CATCCATGCT GGTGGCGGTC TACGAGGCGG CGAACGCCAG CCAGTGCGCC TGCGAGGAAC ACCGGGACAT ATTCACGGCG CTGGTCGGCG GTGACGGCGC CGGCGCGGCC CGCGCCATGC GCGCCCACCT CTCGCTGATC GAAACCCGGT TGCGCCCCGG CGTGATGGCC CCTGCGCGGG ATGCCGTCGA ACTACTGGCG CAGCTATGGA CTGCGTCATC GCACACAGCG CACACCGGCA CCCCCGACGC ACGGCACGCC AACTCCGTCG GCAGGGGCGC GTGA
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Protein sequence | MKDNEQAIYD TLSRALLAGM LTPGAPLREP ALAKVFGISR ERIRKILQRL GTNRLIELVP NRGAFVASPA QEQAHGIYEA RRILEGGIVG HLAASPGADT VERLREHMDR ESAALKSGDR AESVRLSMQF HMILAEATGN FFIVRQVQEL VSRTSMLVAV YEAANASQCA CEEHRDIFTA LVGGDGAGAA RAMRAHLSLI ETRLRPGVMA PARDAVELLA QLWTASSHTA HTGTPDARHA NSVGRGA
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