Gene Veis_4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4279 
Symbol 
ID4694689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4718309 
End bp4719379 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content68% 
IMG OID639852026 
Producthypothetical protein 
Protein accessionYP_999002 
Protein GI121611195 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.877893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.56539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTT GCGTTCCGAA AATAAATAAA CCAGAATGCA GCCCATCGAA GCCGTCGCTT 
CACTCCACGG GGCCTCGCAT GCGTGATGAT CCGTTCGTCC CCTGGCTGCG TGCGGCGCTG
CTGGCCGCTG CGGCGCTGGC CGCGCCCTCG GTGGCGCTGG CGCAAAACGG CAGCGACTAC
CCGAGCAGGC CGATCCGCCT GGTCGTGCCC TACCCGCCCG GCGGTGGCAC CGACGTGATC
GCGCGCATCG TGCAAGAGCG CTTGCAGCCG CTGCTGGGCC AGCCGGTGCT GATCGACAAC
CGCGGCGGCG CTGCCGGCTC CATCGGCACC GAACTGGTCG CCAAGTCGGC GCCCGACGGC
TACACGGTGC TGTTCACGCT GTCCTCGCAC ACCATCAACC CGGCCATCTA CGCCAAGCTC
GCGTTCGACA CGGCGAAAGA CTTCGCCCCC GTGGCCATGG TCGCCTCGCT GCCGCAGATC
CTGGTGGCCC ACACGCAGTT CGCGCCCAAC AGCGTGGCCG ATCTGGTGGC GCTGGCCAAG
ACCCGGCCCG GCGCGATTTC CTTTGCCTCG GCAGGCAACG GCTCGCCCGG GCATCTCGCC
GGCGAACTGC TCAAACTGCG CACCGGCACC CGGATGACAC ATATCCCCTA CCGTGGCGGC
GCTCCGGCCG TGACCGACGT GATTGGCGGC CAGGTGCCGC TGCTGTGGGT GTCGATTCCT
GCGGCGATGC AGTTCGTCAA AGCCGGCAAG CTCAAGGCGC TCGCGGTGTC GACCGCCCGG
CGCAGCGCGG CATTGCCCGA CTTGCCCACG ATGCAGGAGG CCGGCATTGC CGACTTCAAT
GTCGACTCGT GGTACGCCAT GTTCGTGCCC GCCAAAACGC CGCAGCCGGC CATCGACAAG
CTCAACCGCG CCATCAACGC GGTGCTCAGG CAGCCGGACC TGCGCGACAA GTTGCTGGCC
CAGGGCAGCG AAGGCGTTGG CGACACGCCG GAGCAACTCG GCCAGATCGT CAGCGCCGAA
CTCGTGCGCT GGCAGCAACT GGCCAGGCAA GCCAACCTCC ATCCCGATTG A
 
Protein sequence
MERCVPKINK PECSPSKPSL HSTGPRMRDD PFVPWLRAAL LAAAALAAPS VALAQNGSDY 
PSRPIRLVVP YPPGGGTDVI ARIVQERLQP LLGQPVLIDN RGGAAGSIGT ELVAKSAPDG
YTVLFTLSSH TINPAIYAKL AFDTAKDFAP VAMVASLPQI LVAHTQFAPN SVADLVALAK
TRPGAISFAS AGNGSPGHLA GELLKLRTGT RMTHIPYRGG APAVTDVIGG QVPLLWVSIP
AAMQFVKAGK LKALAVSTAR RSAALPDLPT MQEAGIADFN VDSWYAMFVP AKTPQPAIDK
LNRAINAVLR QPDLRDKLLA QGSEGVGDTP EQLGQIVSAE LVRWQQLARQ ANLHPD