| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4208 |
|---|
| Symbol | |
|---|
| ID | 4694838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4636097 |
|---|
| End bp | 4636837 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639851955 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_998931 |
|---|
| Protein GI | 121611124 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.154178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAAG TGCGCGGATT GCGCAAGGCG TTCGGTGCAG TGAAGGCCAC GGATGGCGTG
GACCTGGCGC TGGCCGAGGG CGCGATCCAT GCGCTGATCG GCCCCAACGG CGCCGGCAAG
TCGACGCTGA TCGCGCAGTT GTGCGGCGAA CTGCGCCCCG ATGCCGGCTC CATCGTGCTC
GACGGCGAGG ACGTGACGCG CCTGCCGGCC TTCGCGCGGG CGCGCAAGGG CCTGTCCCGT
TCGTTCCAGA TCACCGAGCT GTGCCCGGAC TACACGGCTC TGGAGAACGT CGTCCTGTCG
CTGATGCTGA CGTCCGGCCG CGCCTTCCAG GCCTGGTCGA ACCCGCGCCG CGACAGCGGG
CTCGTCGGGG GGGCACGGCG CTGGCTCGCC GAGGTCGGCC TCGGCGACCG GGGCGACGCA
CATGTGCGCG ATCTGGCGCA CGGCGAGAAG CGGCAACTGG AGCTCGCAGT CGCGCTGGCG
CGCTCGCCAC GGCTGCTGCT GCTCGACGAG CCGATGGCCG GCATGGGCAG CGAGGAGTCA
TCACGGATGA CGACGCTGCT GCTGGGGCTC AAGCGGCGCT ACACCATCCT GCTGGTCGAA
CACGACATGG ACGCGGTCTT CGCCCTGGCC GACCGCCTCA CCGTGCTGGT CTACGGCAAG
ACGATCTTCA CCGGCACGCC GGACGAAGTG CGCGCCCATC CTGAGGTGCG GTCGGCCTAC
CTGGGAGAAC AAGCATGCTG A
|
|---|
| Protein sequence | MLEVRGLRKA FGAVKATDGV DLALAEGAIH ALIGPNGAGK STLIAQLCGE LRPDAGSIVL
DGEDVTRLPA FARARKGLSR SFQITELCPD YTALENVVLS LMLTSGRAFQ AWSNPRRDSG
LVGGARRWLA EVGLGDRGDA HVRDLAHGEK RQLELAVALA RSPRLLLLDE PMAGMGSEES
SRMTTLLLGL KRRYTILLVE HDMDAVFALA DRLTVLVYGK TIFTGTPDEV RAHPEVRSAY
LGEQAC
|
|---|
| |