Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4197 |
Symbol | |
ID | 4694496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4623311 |
End bp | 4624255 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639851944 |
Product | ornithine cyclodeaminase |
Protein accession | YP_998920 |
Protein GI | 121611113 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.482278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA TCGATACCGA AAGCACCCGC CGTGCATTGC CTTTCGACCG CCTGATCCCG GCCCTTCGAG AAATGTTCAT CGCCGGCTGC GAGGTGCCTT TGCGGCACAC GCATTCGCTC CAGGCCGGGA AGGACGCCGC GCCCCGCACC GTGCTGGTCA TGCCGGCGTG GCAGCACGAC CGCTACCTGG GCATCAAGAC GGTGACCATC TTCCCGGACA ACGCGCAGCG CGGCCTGCCC GGGCTGTTCT CGACCTATGT GCTGTACGAC GCACGCACGG GCGAGCCGCT GGCGCAGATC GACGGCAACG AGATCACGTC GCGCCGCACA GCTGCCGCAT CGGCCCTGGC CGCGTCCTAC CTCGCGCCTG CCGACACGCG CAGCCTGCTG GTCGTCGGCT GCGGGCGTGT CGGCAGTCTG ATTCCCGAGG CCTACCGCGC CGTGCGTCCG ATCGAACGCG TGGTGGTATG GGACCGCGAC GAATCTGCGG CGAAGGCACT CGCTGCACGG CTGTGCGAGC AGAACATCGA GGCGGCTGTC GCGCCCGACC TCGCCCAGGC GATGAACGAC GTCGACATCG TGAGCTGTGC CACGCTTGCC ACGCAGCCGG TGGTGCAGGG CGCGTGGCTG CGGCCTCGCA GCCACCTCGA CCTGATCGGC AGCTTCACGC CGCAGATGCG CGAAGCCGAC GATGCATGCT TTGCCGGCGC GCGTTTGTTT GTCGATACAC AAGAAGCGTT GCAAAAGAGT GGCGAATTGC TCGGGCCCCT ATCGCGCGGC GTGTTCGCCG CCGACGATGT GGCGGGGGAG TTGGCCGACC TGGCCGCGGG CCGGATTCAG GGACGCGTCG AGCGTGACGG GCGAACCGTC TTCAAGGCGG TGGGGACCGC CTTGGAGGAC CTGGCCGCGG CAGTGGTGGT CTACGAGGCT TCCAATTCGA ACTGA
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Protein sequence | MKIIDTESTR RALPFDRLIP ALREMFIAGC EVPLRHTHSL QAGKDAAPRT VLVMPAWQHD RYLGIKTVTI FPDNAQRGLP GLFSTYVLYD ARTGEPLAQI DGNEITSRRT AAASALAASY LAPADTRSLL VVGCGRVGSL IPEAYRAVRP IERVVVWDRD ESAAKALAAR LCEQNIEAAV APDLAQAMND VDIVSCATLA TQPVVQGAWL RPRSHLDLIG SFTPQMREAD DACFAGARLF VDTQEALQKS GELLGPLSRG VFAADDVAGE LADLAAGRIQ GRVERDGRTV FKAVGTALED LAAAVVVYEA SNSN
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