| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4160 |
|---|
| Symbol | |
|---|
| ID | 4694789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4577297 |
|---|
| End bp | 4578556 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639851907 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_998883 |
|---|
| Protein GI | 121611076 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0582] Integrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0690268 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGA CTGAACGCGT CACCGACAAG ACGCTGCGGG CCTGGCTCAA CACCGGCCCC
GTGGACCGTG GCATCGGTGG CGGCCTGACC TTCGTGGCCA CCGCCGCCGG AGCACTCAAG
GGCCAAGCTT CCTGGATTCT TCGCTACCGC TTCGGCGGCG GCGCCCGAGA GAAGGTGCTC
GGCCGCTACC CAGACCTGTC GCTCAAGGAC GCCCGTGAAG CGACGCGCCA GAACCGGGCA
CGCATCCAGC AGGGCGTGGA CGTGGCCGCC GAGAAGCGCG CAGAGCGGCT CAAGGCCCAT
GAACAGGTCG CCGTGGCCGC CCTCGCGCAA GCCTGGTATG ACCGCCACAT CGCCAAGACC
TACAAACACC CCGAGGTCGT GCTTCGCGTC ATCCGCCGCC ACATCGAGCC GGCGATCGGC
AAGCTGGGCG TGACGGAGGT CCGGCCGCTG CACATCGACA AGGTGCTCAC CCGCATCCTC
GATGCAGGCA CGCCGACCGT GGCCAACGAT GCGCTGCGCC ACCTCTTCCG CATGTTCCAC
TTCGCCGTGA AGCGCCGCTG GATCGATGCC AACCCGGTCT CTGGCTTCGA GATCTCCGAC
GCAGGCGGCT TCGAAGTCTC AAGACAGCGC TGGCTGAACC GCGAGGAACT TGCCGCATTC
GCCAAGGCCA TGCAGGACAC GCCCAACTTC GGTCGCCAGA ACGAGCTGGC CGTGTGGCTG
CTGCTCGCCC TGTGCGTGCG CAAGATGGAG TTGCTGTCGG CCCGGTGGAC CGAGTTCGAC
CTGGAGCGTG GCGTCTGGTC GCTGCACCCG TCGCGCACGA AGATGAACCA GTCCATCGAC
ATCCCGCTCG CGGCGCCGGT CCTGCGGTGG CTGGAGGAGG TCCAAGTGTT CTCGTGCAAC
AGCGAGTACC TGTTCCCGCC GCGCCGGCTG ATCCACATGA AGGGAGGTGT GCCGAGGCGG
AACCGCTTCG GCCACATCAG CCCGGACACG CTGAACGTCG CGTTGCTCCG CCTGCCGCTG
GACGACATCG AGCACTTCAC CGTGCATGAC ATGCGCCGCA CGGCTCGCAC CCACATGGCC
GCACTGGGCG TGGACCGCTT CGTCGCGGAG CGGGCGCTGA ACCACAAGGT CCGCGATGTC
GAGGGCGTCT ACAACCAGTA CGACTACTTC GACGAGCGCA AGGTGGCGTT GGATCGATGG
GCGCAACTGC TGGAGAAAGT CTCCTCCTCT TTCAAAGAGT GCGGCACCAC CGCCAGGTAA
|
|---|
| Protein sequence | MTETERVTDK TLRAWLNTGP VDRGIGGGLT FVATAAGALK GQASWILRYR FGGGAREKVL
GRYPDLSLKD AREATRQNRA RIQQGVDVAA EKRAERLKAH EQVAVAALAQ AWYDRHIAKT
YKHPEVVLRV IRRHIEPAIG KLGVTEVRPL HIDKVLTRIL DAGTPTVAND ALRHLFRMFH
FAVKRRWIDA NPVSGFEISD AGGFEVSRQR WLNREELAAF AKAMQDTPNF GRQNELAVWL
LLALCVRKME LLSARWTEFD LERGVWSLHP SRTKMNQSID IPLAAPVLRW LEEVQVFSCN
SEYLFPPRRL IHMKGGVPRR NRFGHISPDT LNVALLRLPL DDIEHFTVHD MRRTARTHMA
ALGVDRFVAE RALNHKVRDV EGVYNQYDYF DERKVALDRW AQLLEKVSSS FKECGTTAR
|
|---|
| |