Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4127 |
Symbol | |
ID | 4694540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4525511 |
End bp | 4526272 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639851874 |
Product | transposase, IS111A/IS1328/IS1533 |
Protein accession | YP_998850 |
Protein GI | 121611043 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.177688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.245647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGATA GCAAGCAGCA AGTGATTGGC GTGGATATCG CCAAGCGGGT GTTTCAACTG CATCGGGTCG ATGTTGAAAC CGGAGAAATC GTGGGCGTGC AACTCAAGCG CGAGAAGTTT CTGGAGCACT TTGCCAACCG GGCCCGCTGC CTCATCGGCA TGGAGGCCTG TGGCGGCGCG CAGCACTGGG CACGCAAACT GATCACGCTC GGGCACGAGG TCAAGCTGCT GCCGGCCAGG ATGGTCAAAC CGTTTGTCGG TCGCAACAAG AGCGATGCGA CCGATGCCCG CGCCATCTGG ACGGCGGTGC AGCAGCCTGC GCTCAGGGCC GTGGCGATCA AATCCAAGGC TCAACAAGCC GTGCTGGCCT TGCACCGCAT GCGCAGCCAG TTGGTCAAAT TCCGCACCGC GCAGATCAAC GGACTGCGTG GCTTGCTGGC CGAATACGGA CGAGTCATGC CCCAAGGCCG GGCAGGCATC AGCCAAGGGA TTGCCACCGC ACTGGCCCAC CTGGTCGAGC GACTGCCCGC CATGCTGCCG GGCAGCCTGC GCGAGCAATG GGCGCGGGTG GGGCAGCTCG ATGATCAAGT TGCGCAGATC GAGCGACATC TGCAGGCTTG GCACAAACAG GACAAAGCCA GCCGCCGCAT TGCCGAGATT CCCGGCGTGG GCCTGCTGAC GGCCACCGTT GCCGTGGCGG CGATGGGCGA TCCCAAGAAC TTCAAGTCAG GCCGCGAGTA TGCCGCCTGG CTCAGCCGCT GA
|
Protein sequence | MNDSKQQVIG VDIAKRVFQL HRVDVETGEI VGVQLKREKF LEHFANRARC LIGMEACGGA QHWARKLITL GHEVKLLPAR MVKPFVGRNK SDATDARAIW TAVQQPALRA VAIKSKAQQA VLALHRMRSQ LVKFRTAQIN GLRGLLAEYG RVMPQGRAGI SQGIATALAH LVERLPAMLP GSLREQWARV GQLDDQVAQI ERHLQAWHKQ DKASRRIAEI PGVGLLTATV AVAAMGDPKN FKSGREYAAW LSR
|
| |