| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4083 |
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| Symbol | |
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| ID | 4694615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4475566 |
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| End bp | 4476828 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639851830 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_998806 |
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| Protein GI | 121610999 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.164352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAA CAAGGAATCA CATGACGGCA TTCACCAGCG CGCGACGGAC CGGCTGGGGC
ACGCTCTTGG CGGGCGCCAT GCTGGTCGCG GCGGCGCAGG CGCAAGATCA ACCCTCGCCT
GCCGGCAGCG TGCCGGCAGC ACAGCCACAC ACCACGGCGC AGCAGCGCGC GACGGCGCAG
CAAGTGGCCG AACACGGCGT GCCGCTGCAA GAACTGGCGC CCGGCGCGCC AGACAGCTAC
AGCGTCAAGC GCGGCGATAC GCTGTGGGGC ATTGCCGGTC TGTTCCTCAA GCACCCATGG
TATTGGCCGC AGTTGTGGGG CATGAACCGC GAGACCATCC ACAACCCGCA CCTGATCTTT
CCGGGCCAGA CGCTGTACCT GGAAAAGGAT GGCGCTTACG CCCGCCTGCG CAGCAGCCGC
TCCGCTGCCG CCGAGCCCGA CACCGTTCGG GTCTCGCCGC GCACGCGCAG TGACAGCCTG
GCCGATGTGG CGCTGCCCAC GCTCAATCCC GATCTGGTCG AGCCTTTTTT GGCCGAACCG
CTGGTGGTCG ACCCGCAGGT CTTGCTGCAA GCGCCACGGG TGGTGGCGAT GACCGATGAC
CGGATGCTGA TGGCCAGTGG CGACCGTGTC TACGCCCGTG GCAGCGCCAA GTCGCCGTTG
CTTGCCGGCA GCACGAGCGC GTCGCGCCGC TACCGCGTGT TCCGCGACGC GACTGCGCTC
AAAGACCCCG GCACCGGCGA GGTGCTGGCC TACGAAGCCC AGTACCTGGG CCAGGCGGAA
CTGGTGCGCG GCGAGTCGAT GGAGGATGTC CCGGACGGCA AGGGCGGCCA TACCAGCAAG
CATGTGCCCG CGACGATCGA TTTGTCGGCC ACCAAAGGCG AGATACAGGC CGGCGATCGC
CTGCTGCCGG CGCCGGCCCG GGTTTTTTCG GGCTATGTCC CGCGCGCCCC GAAGTCCGAT
GTGGATGCCC GTGTGGTGGC GCTCTACGGC AATGCGGCGG TGGAATTCGC GGCGCAAAAC
CAGGTGGTAT CGATCAACAA GGGCGCGCAG GACGGCATCG AGCCGGGCTA TGTGCTGAGC
TTGGTCAACA AGGGCGCGAG CATCGCGGAT GGCACCGAAG AAGGCAAGCC GGCGATCAAG
CTGCCCAATG AGATCAATGG CACGGCCATG GTGTTTCGCA CCTTCGATCG GGTGTCCTAT
GCGCTGATCC TGGAAATCCG CAACGCCGTG CGCGTGGGTG ACCGCCTGGT CAACCCCCGG
TAG
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| Protein sequence | MQQTRNHMTA FTSARRTGWG TLLAGAMLVA AAQAQDQPSP AGSVPAAQPH TTAQQRATAQ
QVAEHGVPLQ ELAPGAPDSY SVKRGDTLWG IAGLFLKHPW YWPQLWGMNR ETIHNPHLIF
PGQTLYLEKD GAYARLRSSR SAAAEPDTVR VSPRTRSDSL ADVALPTLNP DLVEPFLAEP
LVVDPQVLLQ APRVVAMTDD RMLMASGDRV YARGSAKSPL LAGSTSASRR YRVFRDATAL
KDPGTGEVLA YEAQYLGQAE LVRGESMEDV PDGKGGHTSK HVPATIDLSA TKGEIQAGDR
LLPAPARVFS GYVPRAPKSD VDARVVALYG NAAVEFAAQN QVVSINKGAQ DGIEPGYVLS
LVNKGASIAD GTEEGKPAIK LPNEINGTAM VFRTFDRVSY ALILEIRNAV RVGDRLVNPR
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