| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4077 |
|---|
| Symbol | |
|---|
| ID | 4693960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4469739 |
|---|
| End bp | 4470746 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639851824 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_998800 |
|---|
| Protein GI | 121610993 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.960861 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCCA GAAACACCCG GGCCATCGGT TACGGCCTGC TGCTGTTGGC CCTGCTGGCG
GCGCCATTTC TGGGCGCTTA CCCGGTGTTC GCGATGAAGC TGATGTGCTT TGCCCTGTTT
GCTTCGGCGT TCAACCTGCT GCTGGGCTAC ACCGGCCTGC TGTCCTTCGG CCATGCCGCG
TTCCTGGGCG GCGCGGCTTA TCTGGCCGGG CATGCGATCA AGGTCTGGGG CCTGACGCCG
GAACTGGGCC TGCTGCTGGG CAGTGCCGGC GGCGCGCTGC TCGGGCTGCT GTTCGGCTGG
CTGGCGATCC GCCGCCAAGG CATCTACTTT TCGATGATCA CGCTGGCGCT GGCCCAGATG
CTGTTCTTTG CCTGCGTGCA GGCCCCGTTC ACCGGGGGCG AGGACGGCCT GCAGGGCGTG
CCGCGCGGCA AGCTGTTCGG CCTGATCGAT CTGCACAGCG ATCTGGCCAT GTACTACTTG
GTGCTGGTGA TCGTGGTGCT GGCGTTTTTG CTCATCGTGC GCACCATCCA CTCACCGTTT
GGCCAAGTGC TCAAGGGCAT CAAGGAGAAC GAGCCGCGCG CCATCTCGCT GGGCTACGAC
ACGCACCGCT TCAAGCTGCT GGCCTTCGTG CTGTCGGCCG CATTGGCCGG CCTGGCGGGC
GCGCTCAAGA CGCTGGTGCT CGGCTTTGCC ACGCTGTCCG ACGTGCACTG GACTGCCTCC
GGCCAGGTCA TCTTGATGAC GCTGCTGGGT GGCCTGGGCA CCCTGTCCGG CCCGCTGGTC
GGCGCTGCCG TGGTGGTGCT GCTGGAAAAC AAGATCGGCG AATTCGGCAA CCTGCTGGCG
GCGCTGAGCC ATGTGCAATG GTTCCGAACC TTGGGCGAAT CAGTGACCAT GGTCACGGGC
CTGATCTTCG TGGTCTGCGT GCTGGCATTC CGTCGCGGCA TCATGGGCGA AATCAGCGCC
TGGCTGGCCC GGCGCCATGC GAGGGGCGTC AGCAGCCCAC CACACTGA
|
|---|
| Protein sequence | MNSRNTRAIG YGLLLLALLA APFLGAYPVF AMKLMCFALF ASAFNLLLGY TGLLSFGHAA
FLGGAAYLAG HAIKVWGLTP ELGLLLGSAG GALLGLLFGW LAIRRQGIYF SMITLALAQM
LFFACVQAPF TGGEDGLQGV PRGKLFGLID LHSDLAMYYL VLVIVVLAFL LIVRTIHSPF
GQVLKGIKEN EPRAISLGYD THRFKLLAFV LSAALAGLAG ALKTLVLGFA TLSDVHWTAS
GQVILMTLLG GLGTLSGPLV GAAVVVLLEN KIGEFGNLLA ALSHVQWFRT LGESVTMVTG
LIFVVCVLAF RRGIMGEISA WLARRHARGV SSPPH
|
|---|
| |