Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4070 |
Symbol | ruvB |
ID | 4693778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4463756 |
End bp | 4464820 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639851817 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_998793 |
Protein GI | 121610986 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.373713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGC AAACCGACGA CTTCGCCCCT GCTCCCGCCC GGCGCGTTGT CTCTGCGGCG CCCGCTTCGC CCCAGGAGCA GGCGATCGAG CGGGCGCTGC GTCCCAAGCT GCTGCAGGAG TACGTGGGCC AGGTCAAGGC GCGCGAGCAG TTGGAAATCT TCATCGGCGC AGCGCGCCAG CGCGGCGAAG CCCTCGACCA TGTGCTGTTG TTCGGCCCGC CCGGCCTGGG CAAAACCACG CTCAGCCACA TCATTGCCGC AGAACTGGGC GTGAACCTGC GCCAGACCAG CGGACCGGTG CTGGAAAAGC CCAAGGACCT GGCGGCGCTG CTGACCAACC TGGAAAATCG GGATGTCCTG TTCATCGATG AGATCCACCG CCTGTCGCCC GTGGTCGAGG AAATCCTCTA CCCGGCGCTG GAGGACTACC AGATCGACAT CATGATCGGC GAAGGCCCTG CGGCGCGCAG CATCAAGCTC GACCTGCAGC CCTTCACCCT GGTCGGTGCG ACCACGCGCG CCGGCATGCT GACCAATCCG CTGCGCGACC GCTTCGGCAT CGTGGCCCGG CTGGAGTTCT ACAGCGCGCA AGAACTGGCG CGCATCGTCA AGCGCAGCGC CGGCCTGCTC GGTGTCCCGA TGGATGACGC CGGGGGTCTG GAGATCGCCC GCCGCTCGCG CGGCACGCCG CGCATCGCCA ACCGGCTGCT GCGGCGCGTG CGCGACTACA CCCAGGTCAA GGCCGACGGC CACATCACCA AGGACATTGC CGAGCGCGCC CTGGCCATGC TCGACGTAGA CCCCGAGGGC CTGGACGTGA TGGACCGCAA ACTGCTCGAA GCCGTGATCC ACCGCTTCGA CGGCGGCCCC GTCGGGCTGG ACAACATCGC CGCCAGCATT GGCGAAGAAA CCGGCACCAT CGAAGACGTG ATCGAGCCCT ATCTGATACA GCAGGGTTTC TTGCAGCGCA CACCGCGCGG ACGCATCGCC ACGCAGGCCG CCTTCCGGCA CCTGGGGATC GCCGCAGCGC CTGGCGCGCA AGCGCCAGGC TTGTTTGCTG TCTGA
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Protein sequence | MTLQTDDFAP APARRVVSAA PASPQEQAIE RALRPKLLQE YVGQVKAREQ LEIFIGAARQ RGEALDHVLL FGPPGLGKTT LSHIIAAELG VNLRQTSGPV LEKPKDLAAL LTNLENRDVL FIDEIHRLSP VVEEILYPAL EDYQIDIMIG EGPAARSIKL DLQPFTLVGA TTRAGMLTNP LRDRFGIVAR LEFYSAQELA RIVKRSAGLL GVPMDDAGGL EIARRSRGTP RIANRLLRRV RDYTQVKADG HITKDIAERA LAMLDVDPEG LDVMDRKLLE AVIHRFDGGP VGLDNIAASI GEETGTIEDV IEPYLIQQGF LQRTPRGRIA TQAAFRHLGI AAAPGAQAPG LFAV
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