| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3972 |
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| Symbol | |
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| ID | 4693949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4356397 |
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| End bp | 4357812 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639851721 |
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| Product | ABC transporter nitrate-binding protein |
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| Protein accession | YP_998697 |
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| Protein GI | 121610890 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.338423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.174767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGAG AAATCGACAG CCCCCTCTTC CACACTGACG ACGCCGGGTA CGCAGGCAAC
ATTTGCTCCT GCGGCAAACA TGCCAGCCAG ATGCAGATGG CGCATGGCGA TGGGCACCCG
GCGGCGCAGC AACATCTGCG GCGAATACGT TCGCAGGATC CCGAACCATT GAGCAACGAT
GTGGTGGAAG AATCCGTGTT GCGCGCACTG TTTCCGCAGG CAGCGCAGCG TCGCGGCTTC
CTGCGTGCGG TCGGCGCCAA TACGGCGCGC GCGGCCATTG CCAGCATGTT TCCGTTGGAT
GCGTTGCAGG CGATGGCGCA AGAAAAGAAC GGCGCCATCG AAAAGAAGGA CCTCAAAATC
GGCTTCATCG CGCTTACCTG CGCAGCACCG CTGATCATGG CCGATCCGCT CGGCTTTTAC
CGCAAGCAGG GCCTGAACGT GTCGCTCAAC AAAACCGCCG GTTGGGCGCT GATTCGCGAC
AAGATGATCA ACAAGGAATA TGACGCATCG CATTTCCTGT CGCCGATGCC GCTGGCGATG
TCGATCGGTG CGGGCAGCCA TCCGGTGCAG ATGCGCATCG CGACGATCCA GAACATCAAT
GGCCAGGCCA TCACGCTGCA CGTCAAGCAC AAGGACAAAC GCAATCCCGG GCAGTGGAAT
GGCTTCAGGT TTGCGGTGCC GTTCGAGTAT TCGATGCACA ACTTCCTGCT GCGCTATTAC
CTTGCCGAAA ACGGACTCGA TCCGGATCGT GACGTGCAGA TCCGCGTCAC ACCGCCACCG
GAAATGGTGG CCAATCTGCG CGCCGGCAAC ATCGACGGCT TCCTCGGTCC CGATCCGTTC
AATCAGCGCG CGGTGTACGA CGAAGTCGGT TTCATCCATA TCCTCTCCAA GGAAATCTGG
GACGGTCATC CATGCTGCGC GTTCGGCATG TCGGAAGATT TCGTCAAACA AAATCCGAAT
ACCTTCGCGG CCTTGTTCCG CGCCGTGCTG ACTGCCGCAG CGATGGCGCG CGATCCGGCC
AATCGTTCTC TGGTGGCCAA GGTGATTTCG CCGGCAGCCT ATTTGAATCA GCCGGAAACG
GTGGTCGAGC AGGTGCTGAC CGGCCGCTTC GCTGACGGTC TCGGCAACGT GAAAACCGTG
CCGGGCCGCG CCGACTTCGA TCCGGTGCCG TGGGATTCGA TGGCGGTGTG GATTTTGAGC
CAGTTAAAGC GCTGGGGTTA TGTCAAAGGC GAGATCGATT ACAAAGGCAT CGCCGAGCGC
GTGCTGCTGT TGACCGATGC CAAAAAATAC ATGAAGGAAC TCGGCCAGCC AGTGCCGGAC
GGCGCCTATC GCAAACACAT GATCATGGGC AAGGAATTCG ACCCGGCCAA GGCCGACGCC
TACGTCAACA GCTTTGCCAT CAAGAGGACG AGCTGA
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| Protein sequence | MPREIDSPLF HTDDAGYAGN ICSCGKHASQ MQMAHGDGHP AAQQHLRRIR SQDPEPLSND
VVEESVLRAL FPQAAQRRGF LRAVGANTAR AAIASMFPLD ALQAMAQEKN GAIEKKDLKI
GFIALTCAAP LIMADPLGFY RKQGLNVSLN KTAGWALIRD KMINKEYDAS HFLSPMPLAM
SIGAGSHPVQ MRIATIQNIN GQAITLHVKH KDKRNPGQWN GFRFAVPFEY SMHNFLLRYY
LAENGLDPDR DVQIRVTPPP EMVANLRAGN IDGFLGPDPF NQRAVYDEVG FIHILSKEIW
DGHPCCAFGM SEDFVKQNPN TFAALFRAVL TAAAMARDPA NRSLVAKVIS PAAYLNQPET
VVEQVLTGRF ADGLGNVKTV PGRADFDPVP WDSMAVWILS QLKRWGYVKG EIDYKGIAER
VLLLTDAKKY MKELGQPVPD GAYRKHMIMG KEFDPAKADA YVNSFAIKRT S
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