Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3941 |
Symbol | trmD |
ID | 4694250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4327166 |
End bp | 4327930 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639851690 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_998666 |
Protein GI | 121610859 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.55595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTTG ACATCATCAC CCTGCTTCCC GAACTGTTCG CACCGTTGCT GGCCAGTGGC GTGACGCGGC GCGCCTACGC CAGCGGGCAG GTCGATGTGC GCCTGTGGAA CCCGCGCGCG TATGCCGAAG GCCATTACCG CCGGGTCGAT GACCGCCCGT TTGGCGGCGG GCCGGGCATG GTGCTGCTGG CCGAGCCGCT GGCGCGCTGC CTGGCGGCGA TCCGCGCCGG GCGCGGCGAA CCCCGCGCCG GCCAAGCGCC GCTGGTGCTG TTTTCGCCCA TTGGCGAGCC GCTCCGGCAC CGCCTGGTGC AGCGCTGGTC GGCCAGCGCC GGCGCCATCT TGCTGTGCGG GCGGTATGAA GGCGTAGACC AGCGCTTCAT CGACGCGCAT GTCGACTTGC AGATCAGCCT GGGCGACTTT GTGTTGTCGG GCGGTGAAAT TGCGGCCATG GCCTTGCTCG ATGCCGTGGC GCGCCTGCAG CCCGGCGTGC TCAATGACCA GGACAGCCAC CAACTCGACA GCTTCCATCC GGCCCTCGAC GGCCTGCTCG ACTGCCCGCA CTACACGCGC CCGCAGACCT GGGCCGGGCA GTCGGTGCCG GCCGCACTGC TGTCGGGCAA CCATGCGCAG ATCGAGCGCT GGCGGCGCGA GCAGCGCCTG GCCGTCACCG CCCGCCACCG GCCCGAACTG ATCGATGCCG CGCGCCAAGC CGCCCGCCTG AGCGCTGCCG ACGAAGCCTT CCTGGCCCAG CTTGGCGGGG GTTGA
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Protein sequence | MRFDIITLLP ELFAPLLASG VTRRAYASGQ VDVRLWNPRA YAEGHYRRVD DRPFGGGPGM VLLAEPLARC LAAIRAGRGE PRAGQAPLVL FSPIGEPLRH RLVQRWSASA GAILLCGRYE GVDQRFIDAH VDLQISLGDF VLSGGEIAAM ALLDAVARLQ PGVLNDQDSH QLDSFHPALD GLLDCPHYTR PQTWAGQSVP AALLSGNHAQ IERWRREQRL AVTARHRPEL IDAARQAARL SAADEAFLAQ LGGG
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