Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3920 |
Symbol | |
ID | 4694506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4308265 |
End bp | 4309488 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639851668 |
Product | type II secretion system protein |
Protein accession | YP_998645 |
Protein GI | 121610838 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.128223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0658085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCA TCACGGCAGC AAAAAGAGAG ATCAAGGAAA AAGTCTTCGA ATGGGAAGGC AAGGACCGCA ATGGAAAAAT CGTCCGCGGC GAGATCCGGG CGGTTGGTGA AAACCAGGTG CAGGCGAGCC TGCGCCGTCA AGGGGTGCTC TCGACGAAAA TCAAGGAGCG CCGCATGCGC TCCGGCAAGA AGGTCAAACC CAAGGATATT GCACTTTTTA CCCGGCAATT GGCGACCATG ATGAAGGCCG GTGTTCCGCT GCTGCAGTCC TTCGACATCG TGGGGCGTGG CTCTACCAAC CCCAGTGTCA CCAAATTGCT CAATGACATC CGCTCCGATA TCGAGACCGG CACTTCCCTG AGCGGTGCCT TCAGACATTA TCCAAAATAC TTCAACGAGC TCTACTGCAA TCTGGTGGAG GCCGGCGAAA CCGCCGGTAT TTTGGAATCC CTGCTGGATC GGCTTGCCAC TTACATGGAA AAAACCGAGG CGATCAAGTC ACGGATCAAA TCGGCCTTGA TGTACCCCAG CGCGGTGCTG TGCGTGGCCT TTGTGGTGGT GTCGCTGATC ATGGTTTTCG TGATCCCGGC CTTCAAAGAG GTTTTCACCT CCTTCGGCGC CGATCTTCCG CCGCCCACCT TGCTCGTCAT GGCCATCAGT GAGACTTTCG TCCACTGGTG GTGGTTGATT TTCGGGGGTG TCGGTGGTGG CATTTTCTTC TTCATGCAGT CCTGGCGGCG CAATGAGAAA TTGCAGAAGT TCATGGATCG CCTGCTGTTG CGCTTGCCGA TTTTCGGGGT ACTGTTCGAG AAAGCATGCG TTGCGCGCTG GACCCGAACG CTGTCGACGA TGTTTGCCGC CGGGGTTCCG CTCGTGGAGG CGCTGGACTC GGTGGGGGGG GCCGCAGGCA ACTCGGTCTA CGCGTCGGTA ACGGACAAGA TTCAGCAGGA AGTCTCCACC GGCACCAGTC TCACGGTGGC CATGGGCAAC GCCAATATCT TTCCGACGAT GGTGCTGCAA ATGTGTGCCA TTGGTGAAGA GACCGGTTCC ATCGATCACA TGCTGGGCAA GGCCGCCGAT TTTTACGAGG CAGAAGTCGA TACCATGGTG GCGGGCATAT CCAGCCTGAT GGAGCCGATC ATCATCGTTT TTCTTGGCTG CCTGATCGGC GGCATCGTCA TCTCGATGTA TCTGCCGATC TTCAAATTGG GACAGGTCGT GTAA
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Protein sequence | MATITAAKRE IKEKVFEWEG KDRNGKIVRG EIRAVGENQV QASLRRQGVL STKIKERRMR SGKKVKPKDI ALFTRQLATM MKAGVPLLQS FDIVGRGSTN PSVTKLLNDI RSDIETGTSL SGAFRHYPKY FNELYCNLVE AGETAGILES LLDRLATYME KTEAIKSRIK SALMYPSAVL CVAFVVVSLI MVFVIPAFKE VFTSFGADLP PPTLLVMAIS ETFVHWWWLI FGGVGGGIFF FMQSWRRNEK LQKFMDRLLL RLPIFGVLFE KACVARWTRT LSTMFAAGVP LVEALDSVGG AAGNSVYASV TDKIQQEVST GTSLTVAMGN ANIFPTMVLQ MCAIGEETGS IDHMLGKAAD FYEAEVDTMV AGISSLMEPI IIVFLGCLIG GIVISMYLPI FKLGQVV
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