Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3873 |
Symbol | |
ID | 4690822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4268338 |
End bp | 4269348 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639851621 |
Product | 2-nitropropane dioxygenase, NPD |
Protein accession | YP_998599 |
Protein GI | 121610792 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.154933 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCATA CACGGCTCAC AGATCTGTTC GGCATCCGGC TACCCGTGTT GGGCGGCGGC ATGATGTGGC TATCGGACGC ACACTACGTG GCTGCGCTGG CGCGGGCGGG CGCGCTCGGT TTCATCACAC CGCGCTCCTA CGAGAGCCTA GATACCCTGC ACGAAGCCCT GCGCACCTGC CGCCATGCCA GCGAAGGCCA TCCGTTCGGC CTCAACATCA CGCAGTCGCG CCGCAGTGAA GAAAACCGGA TGATCCCGGC CTGGATCGAC ATGGCCCTGG AAGAAGGCGT GCGCAGCTTC GAGACCGTGG GCCCTGCTTC GAGGGCCCTG TTCGAGCGCA TGCAAAACGG CGGCGGTCGC GTCATCCACA AGTGCGCCTT CATCGCGCAC GCGCTCAAGG CGCAGGACGA GGGTGCCGAT GCCGTGGCGC TGGTCGGCGG CGAAGCCGGG GGCCACCCGG GCACCAACGA ACTTCCAACC TTCGTCCTCG GCGCGCTGGC GCTGGAATCG CAACGCCTGC ACATCCCGCT GGCCATCGGC GGCGGCATTG GCAGCGGCCG GCAGATCGCG GCGGCCCTGG CCCTGGGCGC CGACGCGGTG GTCATGGGCA CACGGTTGCT GGTCTGCGAA GAAATCTGGG CGCATGAGGA CTACAAGCGG CATTTGCTGG CCCAGCCGGC GGAAGCCTCG ATCCTGGCGC TGACGCGCAC CGGCAACCCC TGGCGCGTGC TCGACAACGC CACGGTGCAG CGGACCCGCG AGCTGGAAGC GCAGGGCGCT ACCAGCTATC CCGAATTCGG CGCGCTGGCA ACCGGCCGGC TCGGCCGTGA TAACGCCTAT CTGCGCGGCG ACTGGAACAC CGGCCTGCTG TCCATGGGGC CGGCCATCGG CTTCGCCCAT CACATCGAAC CCGTACAAGC TGTGTTGCGC CGTTTGATGG CCGAAACCAG CATGCGTGTG GCTGACGTGC ACGCACGCGA ACTTCCCCTC TCCACCCTCC ATCCCGCATG A
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Protein sequence | MIHTRLTDLF GIRLPVLGGG MMWLSDAHYV AALARAGALG FITPRSYESL DTLHEALRTC RHASEGHPFG LNITQSRRSE ENRMIPAWID MALEEGVRSF ETVGPASRAL FERMQNGGGR VIHKCAFIAH ALKAQDEGAD AVALVGGEAG GHPGTNELPT FVLGALALES QRLHIPLAIG GGIGSGRQIA AALALGADAV VMGTRLLVCE EIWAHEDYKR HLLAQPAEAS ILALTRTGNP WRVLDNATVQ RTRELEAQGA TSYPEFGALA TGRLGRDNAY LRGDWNTGLL SMGPAIGFAH HIEPVQAVLR RLMAETSMRV ADVHARELPL STLHPA
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