Gene Veis_3818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3818 
Symbol 
ID4694793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4214931 
End bp4216109 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content68% 
IMG OID639851567 
Productacetyl-CoA acetyltransferases 
Protein accessionYP_998545 
Protein GI121610738 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.120248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0579572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA TCGTCATCGT TTCCGCCGCC CGTACCGCCG TGGGCAAGTT TGGCGGGTCA 
TTGGCCAAGA CGCCGGCCAG CGAACTCGGC GCCATCGTGA TCCGCGCAGC GCTGGCGCGC
GCGCGGCTGG CCTCCGATCA GATCGGCGAA GTCATCATGG GCCAGGTGCT GGCCGCTGGC
GTGGGCCAGA ACCCGGCGCG CCAGGCCGCG ATGAAGGCCG GTGTGGCCAA GGAGACGCCG
GCGCTGACGA TCAACGCCGT GTGCGGCTCC GGCCTGAAGT CGGTGATGCT CGCCGCCCAG
GCCGTGGCCT GGGGTGACAG CCAGATCGTC GTCGCCGGCG GCCAGGAGAG CATGAGCCTG
GCCCCCCATC TGCTCAACGG ATCGCGCGAT GGCCAGCGCA TGGGCGACTG GAAACTGATC
GACTCGATGA TCACCGACGG CCTGTGGGAT GTGTACCACC AGTACCACAT GGGCATCACC
GCCGAGAACG TTGCCAAAGC CTACGGCATC AGCCGCGAGA TGCAGGACGC CCTGGCCCTG
GCGAGCCAGC AAAAAGCGGC GGCGGCGCAA GACGCCGGTC GGTTCGCGGA CGAGATCGTG
GAGGTCGGCC TGGCGCAAAA AAAGGGCGAC CCGATTTTGT TCAATGCCGA CGAATACCTG
AACCGCAAGA CCAACGCCCA GGCGCTGGCC GGCCTGCGCC CGGCCTTTGA CAAGGCCGGC
AGCGTCACCG CAGGCAACGC CTCGGGCCTG AACGACGGCG CCGCTGCCGT GGTGGTGATG
AGCGCCCAAA AGGCCGCCGC ACTGGGCCTT GCACCCCTGG CGCGCATCGC CGCGTTCGGC
ACCAGCGGGC TGGATCCGGC CACCATGGGC ATGGGCCCGG TTCCGGCATC GCGCAAGGCC
CTGCAGCGCG CTGGCTGGAG CGTCGCCGAT GTCGATCTGT TCGAGCTCAA CGAAGCCTTT
GCGGCCCAGG CCTGCGCAGT CAACCAGGAA CTGGCCATCG ACCCGGCGAA GGTCAATGTG
AACGGCGGCG CGATTGCGAT AGGCCACCCC ATTGGCGCCT CCGGCTGCCG CATTTTGGTG
ACGCTGCTGT ACGAAATGCA GCGCCGCAAC GCGCGCAAGG GCTTGGCCGC GCTGTGCATC
GGTGGCGGCA TGGGCGTGGC GCTGGCCCTG GAGCGCTGA
 
Protein sequence
MEDIVIVSAA RTAVGKFGGS LAKTPASELG AIVIRAALAR ARLASDQIGE VIMGQVLAAG 
VGQNPARQAA MKAGVAKETP ALTINAVCGS GLKSVMLAAQ AVAWGDSQIV VAGGQESMSL
APHLLNGSRD GQRMGDWKLI DSMITDGLWD VYHQYHMGIT AENVAKAYGI SREMQDALAL
ASQQKAAAAQ DAGRFADEIV EVGLAQKKGD PILFNADEYL NRKTNAQALA GLRPAFDKAG
SVTAGNASGL NDGAAAVVVM SAQKAAALGL APLARIAAFG TSGLDPATMG MGPVPASRKA
LQRAGWSVAD VDLFELNEAF AAQACAVNQE LAIDPAKVNV NGGAIAIGHP IGASGCRILV
TLLYEMQRRN ARKGLAALCI GGGMGVALAL ER