Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3811 |
Symbol | |
ID | 4695080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4204916 |
End bp | 4206607 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639851560 |
Product | ABC transporter related |
Protein accession | YP_998538 |
Protein GI | 121610731 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.148208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGGC CCGTCACAGA CCCATCCGCG CCGCTGCCCC CCGGGGGGGG GGAGCATGGC GGCGCCCCGG AGCCATTGCT GCAAGTCAAA GACCTCGGTG TCCGCTTTGG CGCCAAGCAG GTGGTGCGGG GCCTGAACTT TGCCATCGCC GCCGGCGAAA AGCTGGCCCT GGTGGGCGAG TCCGGCTCGG GCAAAACCAT CACCGCCTTG AGCCTGCTGC GCCTGGCTGG CGCGGCCGCC TGCACCGGCC AGGCGCTGCT GCAAGGGCGC GGCGACCTGC TGGCCATGCC CGAGCGCGAA ATGCAGGGCG TGCGCGGCGG CGACATCGCG ATGGTCTTTC AAGAGCCGAT GAGCGCGCTC AACCCGCTGA TGACCATAGG CCGGCAGATC GCCGAAATCC TGTGCCTGAA AAAAAGCCTG AGCGCCGCCC AAGGCGCGCA GACGGCCATC GAACTACTGG CCCAGACCGG CATTGCCGAG CCTGCGCGCC GGGCGAACAG CTTTGCGCAC CAGCTCAGCG GCGGCCAGCG CCAGCGCGCG ATGATCGCCA TGGCCCTGGC CAGCGCGCCC CGGCTGCTGC TGGCCGATGA GCCGACCACG GCGCTGGATG TGACGCTGCG CGGCCAGATT CTGGAACTGT TGTCGAACCT GCAACGCCAG ACCGGCATGG CCGTGCTGCT GATCACGCAT GACCTGAACC TGGTGCGCCG CTTTGCCGAC CGCGTGGCCG TGATGGAGCA GGGCGCCCTG GTCGAGCAGG GGCCGGTGGA CGCCATATTC CGCGCCCCGC AGCAAACCTA CACGCGCCGC CTGATCGCCA GCCAGCCGCG CCGCGCCGTG CGCGAGGAGC GCCCGCCCGA CGGCGCGGCC CCGGTGCTGC AAACGCAGGA CCTGCGCGTG GTCTACCCGA TGGCGCTGCC CGGCCTGCGC GGCTGGTTCA GGAAGACCTC GTTCGTTGCG GTGCAAGCGG CCACGCTGCA ACTGCTGCCG GGCCAGACCT TGGGCATCGT CGGCGAATCG GGCTCCGGCA AGTCCACGCT GGCGCAGGCC ATCCTGGGCC TGCTGCCGCA CAGCGGCCAG TTGCAGGTCG GCGGGCGGGC CTGGCAGCAA CCGGCCACGC GCAACACGCA GGCCAACCAG CAACTGCGCC GCCGGGTGCA GGTGGTGTTC CAGGACCCGT TCTCCTCGCT GTCGCCGCGC CTGACGGTCG AGGAAATCGT CGGCGAAGGG CTCAAGGTGC ACGAGCCGGC GCTCGATGCC GCCGAGCGCC GCCAGCGCGT GCAAGCAGCG CTGGCCGAGG TCGGGCTGCT CCAGGAGCAG GGGCCATCGG CGCAGTTGCT GGAGCGCTAC CCGCATGAAT TTTCCGGCGG CCAGCGCCAG CGCATCGCCA TCGCCCGTGC CCTGATCGTG CAGCCGCAAC TGCTGGTCCT CGACGAGCCT ACCAGTGCGC TGGACGTGAC CATACAGCAG CAGGTGCTGG GCCTGCTGCA ACGCCTGCAG CGCGACAAGG GCCTGAGCTA CCTGCTGATC ACCCATGACG TGCAGGTGAT CCGCGCGATG GCGCATGAGG TGCTGGTGAT GCAGGACGGC GCGGTGCTCG AAAGCGGCAG CGTGAGCGCC GTGCTGGACG CGCCCCGGCA TCCGTACACC CGGCGCCTGG TGGCGGCCGC TGCGCTGCCG GACCGGGATT GA
|
Protein sequence | MSRPVTDPSA PLPPGGGEHG GAPEPLLQVK DLGVRFGAKQ VVRGLNFAIA AGEKLALVGE SGSGKTITAL SLLRLAGAAA CTGQALLQGR GDLLAMPERE MQGVRGGDIA MVFQEPMSAL NPLMTIGRQI AEILCLKKSL SAAQGAQTAI ELLAQTGIAE PARRANSFAH QLSGGQRQRA MIAMALASAP RLLLADEPTT ALDVTLRGQI LELLSNLQRQ TGMAVLLITH DLNLVRRFAD RVAVMEQGAL VEQGPVDAIF RAPQQTYTRR LIASQPRRAV REERPPDGAA PVLQTQDLRV VYPMALPGLR GWFRKTSFVA VQAATLQLLP GQTLGIVGES GSGKSTLAQA ILGLLPHSGQ LQVGGRAWQQ PATRNTQANQ QLRRRVQVVF QDPFSSLSPR LTVEEIVGEG LKVHEPALDA AERRQRVQAA LAEVGLLQEQ GPSAQLLERY PHEFSGGQRQ RIAIARALIV QPQLLVLDEP TSALDVTIQQ QVLGLLQRLQ RDKGLSYLLI THDVQVIRAM AHEVLVMQDG AVLESGSVSA VLDAPRHPYT RRLVAAAALP DRD
|
| |