Gene Veis_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3804 
Symbol 
ID4695023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4198693 
End bp4199847 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content67% 
IMG OID639851553 
ProductAltronate dehydratase 
Protein accessionYP_998531 
Protein GI121610724 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.930793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA CATTTCTCGG CTTTCGGCGC GGACACGGTC CCGCCGGCGT GCGCAACGGG 
ATCGCCGTCA TCTCTGTGAT GGACAACTGC AATCCGGCGA CGCGCGCGAT TGCGCAAGCC
GTGGACGCAA CCCTTGCCGT CACCACGTCG TTCGTGCGCG GCCAGTTCGG CGCCGATCTC
GAGTTCGCTC TCGATTCGCT GGCGGGACTG GGGCGCAATC CGAACATCGC AGGCGTTCTG
CTGGTGGGTC TCGAAGAATC GTCCACGGAA GAAGTGGCGC GCCGCATCCG TCCGGCGGGC
AAGCCGGTGG AGGTCGTGCA CCTGCAGCCC AATGGCACGA TCGAGTGCGT GGCGCAGGGA
ACGCGCCTTG CGGCGCGCAT GGTGCGGCAG GCTTCGCAAA TGAGGCGCCA GCCCTGTCCG
ATGTCGGACC TGGTCATGGG CGTCGAGTGC GGAGGGTCGG ACACCACGTC CGGCCTGAGC
TGCAACCCGA CGATCGGGCG TGCCGCCGAC CGGCTGATCG ATGCCGGCGG GACGGTCATC
ATCTCGGAAA CCTCCGAGTT CATCGGCGCC GAGCATCTGT TCGCAGCCCG CGCGGTGGAC
GCCACGGTCA GGCAGGCGTT CCTGAATGCC GTGCAGGGCA TGGAAGCCAT GGCGGTGGCG
CGCGGCGTCG ATATGCGCGA CTCGCAGCCC GCGCCCGACA ACAAGCGCGG CGGGCTTAGC
ACCGTCGAGG AGAAGGCGCT GGGCGCATTG GCCAAGGCGG GCAAAAGCCC GCTCGTGGGC
GTGCTGAGCT ATGGCCAGGC GCCGGCGCGC AAGGGGCTGC ACTTCATGGA TGCGCCCTCG
GGCGCGGTCG AGAACCTGAC GGGCCTTGCC GCCGGCGGCT GCCAACTGAT CTGCTTTGGC
ACCGGCGTCG GCAACCCGAT CGGCAACATG GTGGCGCCAA CGATCAAGAT CTGCGGCAAC
GTCAACACCG TGCATTCGAT GCGCGACAAC ATCGATTTCG ATGTCAGTGC GATCTTCGAG
TCCTCGGCCA AAATTGCGGA CCTGGGCGAC CAGCTCTACG ACTACGTGGC CGAGGTCGGC
TCAGGCACCC GCATCAGCAG CGAGATCCTG AACATCCGCG AAACGGCCGT CAGCCGGTTC
GAACGCAGCC TCTGA
 
Protein sequence
MSKTFLGFRR GHGPAGVRNG IAVISVMDNC NPATRAIAQA VDATLAVTTS FVRGQFGADL 
EFALDSLAGL GRNPNIAGVL LVGLEESSTE EVARRIRPAG KPVEVVHLQP NGTIECVAQG
TRLAARMVRQ ASQMRRQPCP MSDLVMGVEC GGSDTTSGLS CNPTIGRAAD RLIDAGGTVI
ISETSEFIGA EHLFAARAVD ATVRQAFLNA VQGMEAMAVA RGVDMRDSQP APDNKRGGLS
TVEEKALGAL AKAGKSPLVG VLSYGQAPAR KGLHFMDAPS GAVENLTGLA AGGCQLICFG
TGVGNPIGNM VAPTIKICGN VNTVHSMRDN IDFDVSAIFE SSAKIADLGD QLYDYVAEVG
SGTRISSEIL NIRETAVSRF ERSL