Gene Veis_3772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3772 
Symbol 
ID4694979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4163057 
End bp4164205 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content64% 
IMG OID639851524 
Productgalactonate dehydratase 
Protein accessionYP_998502 
Protein GI121610695 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.451307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA CGCAACTGAC GACCTACCGG GTGCCGCCGC GTTGGATGTT CCTGCGCATC 
GAGACGGACG AGGGCCTCAT CGGCTGGGGC GAACCGGTGG TCGAAGGCCA TGCGCGCGCC
GTTCAAGCGG CAGTGCATGA ATTGGAGCCT TACCTGATCG GGCAAGACCC GGCACGCATC
AATGACCTCT GGCAAGTGAT GTACCGTGCG GGCTTTTACC GTGGCGGAGC GGTCTTCATG
AGCGCCATCG CCGGCGTCGA TCAGGCCCTG TGGGACATCA AGGGCAAGGC GCTCGGCGTC
CCGGTATACC AGTTGCTCGG CGGCTTGGTG CGCGACCGGA TGCGCACCTA CGGCTGGGTC
GGCGGCGATC GCCCCGCCGA CGTGATCGAC GGCATTCGGC AGCGGGTCGA TGCCGGCTTC
ACCCACTTCA AGCTCAACGG TTGTGAAGAA CTGGGCATCA TCGATTCGTC CCGGGCGGTC
GATGCTGCCG TAGCGCGGGT CGCGCAAATT CGGGCCGCGT TCGGCAACAC GGTGGAGTTC
GGCCTCGACT TTCATGGCCG GGTATCGGTC GCGATGGCGG CCGTGTTGAT CAAGGAACTG
GAATACTTGC GCCCGCTCTT CATAGAAGAG CCGGTGCTGG CCGAACAGGC CGAGCATTAC
CCGAAACTGG CCGCCAAGAC ACATCTGCCG CTGGCGGCTG GCGAGCGCAT GTACTCCCGC
TTCGAGTTCA AGCGGGTGCT TGCCGCCGGC GGAATCGCCA TCTTGCAGCC GGATTTGTCC
CATGCGGGCG GCATCAGCGA ATGCTTGAAG ATCGCCGCCA TGGCCGAAGC CCATGACGTG
GCCATCGCGC CCCACTGCCC GCTGGGGCCG ATTGCGCTCG CGTCCTGCCT GCATGTCGAC
TATGTCAGTT GGAACGCCAC GCTACAGGAA CAAGGCATGG GCATGCACTA CAACCGGGGC
GGCGAAGTGC TCGACTATGT GCTGAACCCG CAAGACTTCC GGCTCGACAA CGGCTTTATC
GCGCCATTCA CCAAGCCCGG CCTGGGCGTA GAGATCAACG AAGCGCTGGT GCTCGAACGC
AGCCGCGATT GCCCCGACTG GCGCAATCCG GTGTGGCGCC ATGCTGACGG CAGTGTGGCG
GAGTGGTAG
 
Protein sequence
MKITQLTTYR VPPRWMFLRI ETDEGLIGWG EPVVEGHARA VQAAVHELEP YLIGQDPARI 
NDLWQVMYRA GFYRGGAVFM SAIAGVDQAL WDIKGKALGV PVYQLLGGLV RDRMRTYGWV
GGDRPADVID GIRQRVDAGF THFKLNGCEE LGIIDSSRAV DAAVARVAQI RAAFGNTVEF
GLDFHGRVSV AMAAVLIKEL EYLRPLFIEE PVLAEQAEHY PKLAAKTHLP LAAGERMYSR
FEFKRVLAAG GIAILQPDLS HAGGISECLK IAAMAEAHDV AIAPHCPLGP IALASCLHVD
YVSWNATLQE QGMGMHYNRG GEVLDYVLNP QDFRLDNGFI APFTKPGLGV EINEALVLER
SRDCPDWRNP VWRHADGSVA EW