Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3626 |
Symbol | |
ID | 4691406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4010880 |
End bp | 4012418 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639851381 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_998360 |
Protein GI | 121610553 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACA AATTGATCAT TTTCGACACC ACCTTGCGCG ACGGCGAGCA GTCCCCCGGG GCCTCGATGA CCAAGGACGA AAAACTGCGC ATTGCGCGCC AACTCGAGCG GCTGAAGGTG GATGTGATCG AGGCCGGCTT TGCCGCCAGT TCCAACGGCG ATTTCGACGC GGTTCGGGCG ATCGCCAGCA CCATCCGGGA GGCCACCATC TGCTCGCTGG CCCGCGCCAA TGACCGTGAT ATCGCCCGTG CTGCGCAGGC GCTCGAAGGG GCGGCCAATG CGCGCATCCA TATCTTCATT GCCACCTCGG CGCTGCACAT GGAAAAGAAG CTGCGCATGA CGCCCGGGCA GGTGCTCGAG CAGTCGCTGC AATCGGTCCG TTTCGCCCGC AATCTCGTGG CCGACATCGA GTTCAGCCCC GAGGACGGCT ACCGCAGCGA CCCGGATTTC CTGTGCCGCG TGATCGAGGC CGCGATCGCC GAGGGCGCCA CGACGATCAA TGTGCCCGAC ACCGTCGGCT ACGCCATTCC CGAGTTGTAT GGCAACTTCA TCAAGATGCT GCGTGAACGG GTGCCGAACA GTGACAAGGC GATCTGGTCC GTGCATTGCC ACAACGACCT GGGCATGGCG GTGGCAAACT CGCTGGCCGG CGTGAAGATG GGCGGCGCGC GCCAGGTCGA GTGCACGATC AACGGCCTGG GCGAGCGCGC CGGCAATTGC TCGCTGGAAG AGGTGGTGAT GGCCGTCAAG ACGCGGCGCG ACTACTTTGG CCTGGACCTT GGCATCGCCA CGCAGCATAT CCTGGCGGCC AGCCGCATGG TCAGTCAGAC CACGGGTTTT GCCGTGCAAC TGAACAAGGC GATCGTGGGT GCGAATGCGT TCGCGCATGC CAGCGGAATT CACCAGGACG GCGTGCTCAA GGCCCGCGAC ACCTACGAAA TCATGCGCGC GCAGGATGTG GGCTGGAGCG CGAACAAGAT GGTGCTGGGC AAGCTCAGCG GCCGCAGCGC CTTCAAGCAG CGCCTGCAGG AGCTCGGTGT GAGCCTGGAC AGCGAGGCCG AAATCAACCT GGCGTTCGCG CGCTTCAAGG AACTGGCCGA CCGCAAGAGC GAGATTTTCG ACGAAGACAT TCTGGCGCTG GTCAGCGACG AGAGCGTCAG CGGCGACAAC GAGCAGTACG GCTTTGTCTC GCTGTTCCAG CAAAGCGAGA CCGGCAAGCA GCCGCACGCG CGCATCGTGT TCACGGTCAA CGGACAAAAT GTGCACGCCG AGGCCCAGGG CAATGGGCCG GTCGATGCCT CGCTCAAAGC CATCGAGGCG CATGTCCACA GTGGCGCCGA GATGGTGCTG TATTCGGTCA ACGCCATCAG CGGCTCGACC GAGAGCCAGG GGGAGGTGAC CGTGCGCCTG CAAAACAGCG GCCGTATCGT CAATGGGGTG GGAGCCGACC CGGACATCGT GGTCGCTTCG GCGAAAGCCT ATTTCAGTGC GCTGAACAAG TTACAAAATA AAGCCGATCG GGTGGCGGCG CAGGGTTGA
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Protein sequence | MADKLIIFDT TLRDGEQSPG ASMTKDEKLR IARQLERLKV DVIEAGFAAS SNGDFDAVRA IASTIREATI CSLARANDRD IARAAQALEG AANARIHIFI ATSALHMEKK LRMTPGQVLE QSLQSVRFAR NLVADIEFSP EDGYRSDPDF LCRVIEAAIA EGATTINVPD TVGYAIPELY GNFIKMLRER VPNSDKAIWS VHCHNDLGMA VANSLAGVKM GGARQVECTI NGLGERAGNC SLEEVVMAVK TRRDYFGLDL GIATQHILAA SRMVSQTTGF AVQLNKAIVG ANAFAHASGI HQDGVLKARD TYEIMRAQDV GWSANKMVLG KLSGRSAFKQ RLQELGVSLD SEAEINLAFA RFKELADRKS EIFDEDILAL VSDESVSGDN EQYGFVSLFQ QSETGKQPHA RIVFTVNGQN VHAEAQGNGP VDASLKAIEA HVHSGAEMVL YSVNAISGST ESQGEVTVRL QNSGRIVNGV GADPDIVVAS AKAYFSALNK LQNKADRVAA QG
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