Gene Veis_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3500 
Symbol 
ID4691571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3872807 
End bp3873727 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content61% 
IMG OID639851256 
Productband 7 protein 
Protein accessionYP_998238 
Protein GI121610431 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.674011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0455255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCG CCATCGTCAT CCTGATCATT GCCGCGATCT TCATCGCCCG TTCCGTCAAG 
GTCGTTCCCC AACAAAACGC CTGGGTCAGG GAACGCCTGG GCAAATACGC CGGCACCCTC
ACGCCGGGCC TGAACTTCCT GGTGCCCTTC ATCGACAAGG TAGCCTACAG ACACAGCCTC
AAGGAAATCC CGCTCGATGT GCCCAGCCAA GTCTGCATCA CACGCGACAA CACCCAGTTG
CAGGTCGATG GCATCTTGTA CTTCCAGGTC ACCGACCCGA TGCGCGCCAG TTACGGCTCG
TCCAACTACA TCATGGCCGT GACCCAGTTG GCGCAAACCT CGCTGCGCTC GGTCATCGGC
AAGCTGGAAC TGGACAAGAC CTTTGAAGAA CGCGACATCA TCAACGCCCA GGTGGTGCAA
GCCATCGACG AGGCGGCGCT GAACTGGGGC GTGAAGGTGC TGCGCTACGA AATCAAGGAC
CTGACCCCGC CGAAGGAAAT CCTGCACGCG ATGCAGCAGC AAATCACCGC CGAGCGCGAA
AAGCGCGCGC TGATTGCCGC ATCCGAAGGC CGCCGCCAGG AGCAAATCAA CATCGCCACA
GGCGAGCGCG AGGCATTCAT CGCCCGCTCC GAAGGCGAGA AACAGGCCGT CATCAACAAG
GCGCAAGGCG AAGCCGAATT CATCAAAGCC GTCGCCGAAG CCACGGCACA GGGCATCGAA
CGTGTAGCCA GCGCGATACG CCTGCCAGGC GGCGAACAGG CAGTCCAACT CAAGGTGGCC
GAAAAGGCCG TCGCCGCCTA CAGCCAGGTG GCATCGGATG CCAACACCAC CCTGATCGTG
CCGAGCAACA TGACCGAGGT ATCGGCACTG ATAGGCTCGG CGATGAAGAT GCTCCAGGCC
ACGACGACCA AGGCCGGGTA G
 
Protein sequence
MEVAIVILII AAIFIARSVK VVPQQNAWVR ERLGKYAGTL TPGLNFLVPF IDKVAYRHSL 
KEIPLDVPSQ VCITRDNTQL QVDGILYFQV TDPMRASYGS SNYIMAVTQL AQTSLRSVIG
KLELDKTFEE RDIINAQVVQ AIDEAALNWG VKVLRYEIKD LTPPKEILHA MQQQITAERE
KRALIAASEG RRQEQINIAT GEREAFIARS EGEKQAVINK AQGEAEFIKA VAEATAQGIE
RVASAIRLPG GEQAVQLKVA EKAVAAYSQV ASDANTTLIV PSNMTEVSAL IGSAMKMLQA
TTTKAG