Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3415 |
Symbol | |
ID | 4694007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3785425 |
End bp | 3786741 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639851172 |
Product | extracellular solute-binding protein |
Protein accession | YP_998154 |
Protein GI | 121610347 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.136491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTATC GCAAGACCCG GATCGCACTG TGCTTTGCGC TGTGCACGGC AGGCGCAGCG CAGGCTGCCA GCACGACCGA ACTGGTCATC GCCACGGTCA ACAACCGGCA GATGATAGAG ATGCAAAAGC TCACGCCGCA GTTCGAAAAG AGCCATCCCG ACATCAAGCT CAAGTGGGTG ACGCTGGAGG AGGGCGCGCT GCGCCAGCGC GTCACGACGG ACATTGCGAC GCAGGGCGGG CAGTTCGACG TGATGACCAT CGGCATGTAC GAGACGCCGA TCTGGGGCAA GAAAGGCTGG CTCAAGGAGT TCAAGCCGGA CGCCGGGTAC GACGTCGACG ATCTGCTGGC CCCCATCCGT GCCGGTCTGT CGGCCAACGG CAAGCTGTAT GCGGCCCCGT TCTATGGCGA GAGCTCGTTC ACGATGTACC GCGCCGACCT GGCGCAGGCG GTCGGCGCGA GCCTGCCCGA GCAGCCCACC TGGGAGCAGA TTCGCGCTTT CGCCGCCAAG GTCCACAACC CCGGCAAGGG CCTGTATGGC GTGTGCCTGC GCGGCAAGCC TGGCTGGGGC GACAACATGG CGCTGCTGTC GACCATGGTC AACACCTTTG GTGGCCAATG GTTCGACATG GGCTGGAAGC CCCAGGTGGA CAGCAAGGCG TGGCACGACG CGATCTCGTT TTATCTGGAC CTGATGAAAA AGTACGGCCC GCCAGGTGCG AGCGCCAACA GCTTCAACGA AAACCTGGCG CTCTTTGCTG AAGGCAAATG CGGGGTCTGG GTGGATGCCA CCAGCGCCGG GACCTCGGTG GCAGACCCGA AGTTCAGCAA GGTGGCCGAC AAAGTGGCCT TCGCCAAGGC GCCGATCGCC GTCACGCCCA AGGGCGCGAG CTGGCTGTGG GCTTGGGCGC TGGCGATTCC GGGCGCCACG AAGAAGGAAG AGCAGGCGCA AAGGTTCATC AACTGGGCGA CATCCAGGGA TTACGTGCAA CTGGTGGCCA AGGAGTCGGG CTGGATCGCC GTGCCCACCG GCAACCGCGC TTCGACCTAT GACCGCGCCG AGTACCAGCA GGTCTCCAGG TTTGGCCAGA TGGAGCGCAA AGCCATCTTG GCGGCCAATC CCGATGATCA GACGCTGCCC AAGTCCCCGT ACACCGGGGT CCAGTTTGCC GCCATTGCCG AGTTTCAGGC GATAGGCTTG GCCGTGGGCC AACAGTTGGG CGCCGCGCTG GCGGGCAAGG TCAGTGTGGC GCAGGCGCTC AAGACCGGGC AGACCGCCGC AGACCGGGAG ATGCGCAAGG GGGGTTATTA CAAATAG
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Protein sequence | MMYRKTRIAL CFALCTAGAA QAASTTELVI ATVNNRQMIE MQKLTPQFEK SHPDIKLKWV TLEEGALRQR VTTDIATQGG QFDVMTIGMY ETPIWGKKGW LKEFKPDAGY DVDDLLAPIR AGLSANGKLY AAPFYGESSF TMYRADLAQA VGASLPEQPT WEQIRAFAAK VHNPGKGLYG VCLRGKPGWG DNMALLSTMV NTFGGQWFDM GWKPQVDSKA WHDAISFYLD LMKKYGPPGA SANSFNENLA LFAEGKCGVW VDATSAGTSV ADPKFSKVAD KVAFAKAPIA VTPKGASWLW AWALAIPGAT KKEEQAQRFI NWATSRDYVQ LVAKESGWIA VPTGNRASTY DRAEYQQVSR FGQMERKAIL AANPDDQTLP KSPYTGVQFA AIAEFQAIGL AVGQQLGAAL AGKVSVAQAL KTGQTAADRE MRKGGYYK
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