Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3328 |
Symbol | |
ID | 4694725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 3713332 |
End bp | 3714315 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639851091 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_998076 |
Protein GI | 121610269 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.559777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0939424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTG TTTCTACTGC TCCCCTCATC GAAGTCCGCA GACTCAAGAA ATACTTCGGT AGCAGCGAGC ACCCGGTGCG CGCGGTCGAC GATGTGTCGT TCGCGATCCA GCCCGGCGAG ACGCTGGGCC TGGTCGGCGA ATCGGGCTCG GGCAAGAGCA CCATCGGCCG CACCGTGCTG CGGCTGGTCG AGCGCACCGA GGGGCAGGTG CTCTACCGTG GCGAGGACAT CGGCGCGCTC TCGGGCGAGC GCATGCGCCG GTTGCGCAGC AAGCTGCAGA TCATCTTCCA GGACCCGTAT GCGAGCCTGA ACCCGAAGAT GCGCATCCGC GCGATCCTCG GCGAGGCGCT GGCCACGCAC GGCCTGCACA AGGGCGCGGC GGCGCGCGAC CAGCGCATTG CCGAGCTGCT CGCGACCGTG GGCCTGCGCG CCGAGCATGC GAGCCGCTTT CCGCACGAGT TCTCGGGCGG GCAGCGCCAG CGCATCGGCG TGGCGCGCGC GCTCGCGGTG GAGCCCGAGT TCATCGTGGC GGACGAGCCG CTGTCGGCGC TCGACGTGTC GATCCAGTCG CAGGTCATCA ACCTGCTGGC AGACCTGCGC GAGCGCCTCG GCCTCGCCAT GCTCTTCATC TCGCACGACC TGGACGTGGT CGAGTACCTG TGCGACCGCG TGGTGGTGCT GTACCTGGGC AAGGTGATGG AGGTGGCCGC GACCGACGAA CTGTTCGCGC GGCCATCGCA CCCCTACACC CAGGCGCTGC TGGCCGCGCG CCCGAAGCCC GACCCCACGC TCGCCACCGG GCACATTGCC CTGAAGGGCG ACATTCCCAG CCCCCTCGCG CCGCCCTCGG GCTGCGTGTT CCGCACGCGC TGCCCGCACG CCATCGAAGC CTGCGCGCAG ACCGTGCCAT CGCTCGACGA GATATCTCCC GGACACTACA GCGCCTGCAT CCGCAAGGAA CGACTCTCCC ACATCACCGC ATGA
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Protein sequence | MTAVSTAPLI EVRRLKKYFG SSEHPVRAVD DVSFAIQPGE TLGLVGESGS GKSTIGRTVL RLVERTEGQV LYRGEDIGAL SGERMRRLRS KLQIIFQDPY ASLNPKMRIR AILGEALATH GLHKGAAARD QRIAELLATV GLRAEHASRF PHEFSGGQRQ RIGVARALAV EPEFIVADEP LSALDVSIQS QVINLLADLR ERLGLAMLFI SHDLDVVEYL CDRVVVLYLG KVMEVAATDE LFARPSHPYT QALLAARPKP DPTLATGHIA LKGDIPSPLA PPSGCVFRTR CPHAIEACAQ TVPSLDEISP GHYSACIRKE RLSHITA
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