Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3292 |
Symbol | |
ID | 4690892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 3672884 |
End bp | 3675004 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639851055 |
Product | inner-membrane translocator |
Protein accession | YP_998040 |
Protein GI | 121610233 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0638637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.743935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCTCCG AAAGCAATTG GGTCGCGCTC AGGTATCGGC TGGTCCCCGA TCATCTGATC GGCGAGATTC TGTCCAAGAA ATGGATAGAC AACGCCATCG CCCTGCTGGT CATGGTCTGC GTCGTCGTGG TCTTCGGCCA GCTGATTCCC GAGTTCTTTA CGGCCGGCAA CCTGCAGACG ACATCGCGGC AGTTCGGTGA ATTCGCGCTG GTGTGCCTGG CGATGATGAT CGTCGTCATC GTCGGCGGCA TCGACCTGAG CGTGGGCTCG AACTTTGCGC TCGGCAACTT CCTGACGCTG GCATTGCTGA ACCTGGCCAA TCTGCCGCTG CCGGCGGTCA TTCCGATCGT GATGCTGGTC TGCGCTGCGG TGGGCCTGGT CAACGGCGTG CTGATCGGTT ACTTGCGCCT GCGCGCATTC CTGACGACCT TGGTCACCCT GATCATCGTG CGCGCGATCG TCGACATGCT GCTGCTGCGC TATGCGCAAG ACATGTCGGT CGGGTTCTTT GAATCGGACC TGTGGGATCT GATGGGCTTG GGGCATATCG CCGGACTGCC TTTCAGCTTC GTGGTGCTGG CGGCGGTCGC CGTGGTCGGC CATATTGCGC TGACGCGCAG CCGGCCCGGC TGGCGGGCAA TGGCCATCGG TGGCTCGCGC CGTTCTGCGC ACAACATCGG CTTGCCGGTG CGCGCAACGG TGTGCGGGGC CTATGTGATC TCCGGCATGC TGTGCGGGAT GGGCGGCATC CTCTATGCGG CCAGGCTCAG CGGCGCAGGC ACCGACACCG GCATGGGGCT GGAGATATCG GCCCTGACCG CCGTGGTGCT GGGCGGCAAC AGCCTGGGCG GAGGGCGCGG CTCCGTGGTC AAGGCGCTGA TCGGCGCGGT CACGGTGCTG ATTTTGACCA ACGGGGTGCT GCGCATCGGC CTGAACAGCG GTTCCGGCCC GATGGTTCTG GGCTTGACCT TGCTCTTTGC CGTGTTCATC GATGTCAGAT GGCTCAAGCA CCGCGACAAG CTGCTGTCCA AGCTCTACGT CTCGCCGACC TATATTGCGC TCCGACCGCC GCGCCCGATT GCTGCCGGTT CCGGCTCGCC GCTGGCTTTG AACGATCGCC TGTCGGGTGT GCAAACCATC GGCCTGGGCG TTGTCGAGTC GCCCGAGGAT GTGATCCTCG ACGATGACGA CTTCCTGTAC TGCGGCACGC GCCACGGCGA CATCGTGCGT TTTACGCCCC CCGGCTACCA GCACTCGGAG GTCTTCGCCC ATATCGGCGG AACGCCGCTG GGGATGACGT TCGACAAGGA GCGCAACCTG CTCGTCTGTG TCGGCGGCAT GGGCCTGTAC CGGATCGGGG TCGATCGCAA GCTGTCCAAG CTCACGGACG AGACCAACCG GTCTGCGTTC TCCGTGATCG ACGATTCGCG GCTGCGCTTG GCCGATGACC TGGACATTGC GCCCGACGGG CGGGTCTTCT TCAGCGAGGC AACGATCCGC TACGAGATGC ACGACTGGCC CGTGGATGCG CTGGAAAGCC GCGGCAACGG ACGGATCATC TGCTACGACC CGCGCTCCGG CAAAACGCAG ACCGTGGTGC GCAACCTGGT GTTTCCGAAC GGCGTGTGCC TGGCGCACGA TGGGCAGTCC ATGCTTTTCG CCGAGAGTTG GGCCTGCACG ATCAGCCGGT ACTGGATCAG CGGCCCGAAG GCCGGCCGCA CGGAATGTCT GATCGACAGG CTGCCGGGCT ACCCGGACAA CATCAACCGT GCCTCTGACG GTACCTACTG GGTCGCGCTG ATGGGGATGC GCTCGCCCGC GCTGGATGTC GCGTTGCGCA TGCCGGGCTT CAGGCGCCGG ATGGCCAGGC GCATCGCGCC GGACCAGTGG CTGTATCCGA ACCTGAACAT CGGCTGCGTC GCGCGCTTCG ACGACCAGGG GAACATCCTG GAGTCGATGT GGGATCAGGG AGCGAAGAAC CATCCGATGA TCACCTCGAT GCGCGAGCAC AAGGGCTGGC TGTATCTGGG CGGGATCACG AACAACCGGA TCGGGCGGGT GCGCCTGGAG CGGGCAGACC CAGGCTGGAG CAGCTATCAG AGCTACTGGG GCAGGCAATG A
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Protein sequence | MASESNWVAL RYRLVPDHLI GEILSKKWID NAIALLVMVC VVVVFGQLIP EFFTAGNLQT TSRQFGEFAL VCLAMMIVVI VGGIDLSVGS NFALGNFLTL ALLNLANLPL PAVIPIVMLV CAAVGLVNGV LIGYLRLRAF LTTLVTLIIV RAIVDMLLLR YAQDMSVGFF ESDLWDLMGL GHIAGLPFSF VVLAAVAVVG HIALTRSRPG WRAMAIGGSR RSAHNIGLPV RATVCGAYVI SGMLCGMGGI LYAARLSGAG TDTGMGLEIS ALTAVVLGGN SLGGGRGSVV KALIGAVTVL ILTNGVLRIG LNSGSGPMVL GLTLLFAVFI DVRWLKHRDK LLSKLYVSPT YIALRPPRPI AAGSGSPLAL NDRLSGVQTI GLGVVESPED VILDDDDFLY CGTRHGDIVR FTPPGYQHSE VFAHIGGTPL GMTFDKERNL LVCVGGMGLY RIGVDRKLSK LTDETNRSAF SVIDDSRLRL ADDLDIAPDG RVFFSEATIR YEMHDWPVDA LESRGNGRII CYDPRSGKTQ TVVRNLVFPN GVCLAHDGQS MLFAESWACT ISRYWISGPK AGRTECLIDR LPGYPDNINR ASDGTYWVAL MGMRSPALDV ALRMPGFRRR MARRIAPDQW LYPNLNIGCV ARFDDQGNIL ESMWDQGAKN HPMITSMREH KGWLYLGGIT NNRIGRVRLE RADPGWSSYQ SYWGRQ
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