Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3284 |
Symbol | |
ID | 4690931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 3663588 |
End bp | 3664670 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639851047 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_998032 |
Protein GI | 121610225 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.970201 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGTC GTTCCATCAT CAAACATGCC GGCATCGCCG GCGTGCTGGC CGCAGGCGTA GCGCCTGCCG TCCACGCGCA GGCCGCCATC CGCTGGCGTC TGGCTTCGAG CTTTCCCAAG TCGCTGGACA CCATTTACGG CTATGCAGAA GTGTTCTCCA AGGCCGTCAA AGCCATGACG GGCGGCAAGT TTGAAATCTC CGTGCATGCC GGCGGCGAGT TGATGCCGCC CTTTGGCGTG GTCGATGGCG TGCAGCAAGG CACCGTGGAA CTGGCGCATA CCGTGCCGTA CTACTTCTAT GGCAAGAACC CGGCGTTTGC ACTGGGATCG GCCGTGCCCT TCGGCTTCAA CGCCCGCCAG ATGAACGCCT GGATGATGCA CGGCAACGGG CGCAAGCTGA TGAACGAGTT CTACGGCGCC TACAACATCA TCAGCTTTCC TGGCGGCAAC ACCGGCGCAC AGATGGGCGG CTGGTACCGC AAGGAAATCA AGTCCCCCGC CGACTTCAAG GGCATGAAGA TGCGCCTCGG GGGCGGCCTG ATCGGCGAAG TGATGCAAAA GCTCGGCGCC GTGCCGCAAA GCATCCCCGG CGGTGAAATC TACCAGGCAC TGGAAAAAGG CACGCTCGAC GCCGCTGAAT GGGTCGGCCC CTACGACGAC CAGAAACTGG GCTTTCACAA GGTGGCCCCG TACTACTACT ACCCCGGCTG GTGGGAGGGC GGTCCGGAGA TATCGCTGTA CATCAACCAG AAAGCCTTCG ACAGCCTGTC GGCGGACAAC AAGGCCATCG TCGAAGCCGC CGCCGGCATG GCCCATGGCG ACATGCTGGC CAAGTACGAC GCGCTGAACC CCACGGCCCT CAAACAACTG CTGGCCGCCC AAGCCAAGGT GCTGCGGTTC TCGCCGGCCG TGCTCGACGC CTCGTTCAAA GCCTCGATGG AAGTGTTCGC AGAAAACGAC GCCAAAAGCC CTGAGTGGAA GAAGATCTAC GCCGACATGC GCACCTTCCA GCGCGACCAG ATCCTGTGGT TCCGCGTTGC CGAAGGGCAT TACGACAACT TCATGGCGGT GCAGAAGATC TAG
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Protein sequence | MQRRSIIKHA GIAGVLAAGV APAVHAQAAI RWRLASSFPK SLDTIYGYAE VFSKAVKAMT GGKFEISVHA GGELMPPFGV VDGVQQGTVE LAHTVPYYFY GKNPAFALGS AVPFGFNARQ MNAWMMHGNG RKLMNEFYGA YNIISFPGGN TGAQMGGWYR KEIKSPADFK GMKMRLGGGL IGEVMQKLGA VPQSIPGGEI YQALEKGTLD AAEWVGPYDD QKLGFHKVAP YYYYPGWWEG GPEISLYINQ KAFDSLSADN KAIVEAAAGM AHGDMLAKYD ALNPTALKQL LAAQAKVLRF SPAVLDASFK ASMEVFAEND AKSPEWKKIY ADMRTFQRDQ ILWFRVAEGH YDNFMAVQKI
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