Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3244 |
Symbol | |
ID | 4693993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3620479 |
End bp | 3621552 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639851007 |
Product | sigma E regulatory protein, MucB/RseB |
Protein accession | YP_997992 |
Protein GI | 121610185 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3026] Negative regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0118004 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGT TTGGCGTGGC GGCGCTGTCC GGACGGCTGC GGCATCGATG GTTCGGGTCG ATGCTGGCGG CGGCTTGCTG CGGCCTGGGC CTGCTGCCTT GTGTCATCGG CGCCGCGCAA GCGCAAGGCG TTGCCGCCGC TGAGCCTGTG GCAGCGCCCG CCGAGCGCGA TATGGCGCAA TGGCTCGAAC GCATGCGCAG TGCGCCCTGC CACCGCTCCT ATGCGGGCAC TTTCGTCGTG CTGTCGGCCA ATGGCGCGAT GTCGAGTGCG CGCATCTGGC ATGCCTGTGA TGGGCAGCGG CAGATGGAGC GGGTCGAATC GCTCAGCGGC ACGCCGCGCA CCGTCTTCAG GCGCGATGAC GAGGTGCGCA CCTTTTTGCC GCAGCAGCGC ATCGTGCGCG CCGACCGGCG CGACGCTGTC GGTCTTTTTC CGCCGGTTCC GCCGGTCAGT GGCACCTCGG TCGGGCAGTT CTACGTCTCC CGTCTGATGG GACAGGAGCG GGTGGCCGGA TTCGTTGCCG ATGTGGTGTG GTTCAAGCCC GTCGATACGC TGCGCTTTGG CTATCGGCTG TGGAGCGAGC GCGACACCGG GCTGGCGGTG AAGCTGCAAA CGCTGGCCCC GGACGGACGG GTGCTGGAGC AGGCCGCGTT TTCAGAGCTG GATTTGAACG CGCCGGTGCA GGTCGATCAG CTCGCGCGCC TGATGGACGC CACGGCGGGC TACAAGCTCA TTGCTCCGCC CGTGGTCAAA ACCACCGCCA AAGAGGAGGG CTGGACGCTG CGCCAGCCGG TCGCGGGCTT TGTTCCAGTC AGTTGCCACC GACGCGCCGT CTCCATGGCC GATGATGCGC CCAGTGTGTT GCAGTGTCTT TATTCCGATG GGCTGGCTTC CGTTTCGCTG TTCCTGGAGC CCTTTGACCC GCAGCACCAT CCGGCGCGGC CTCAGATATC CGGCATGGGT GCGACGCAGC TTTTGGCCCA GCGTGTCGCG CCTGACATGT GGGTCACTGC GGTGGGCGAG GTTCCGCTGT CGACGCTGCG CCTTTTTGCC GGGCAGTTGG AGCGTTTGCG TTGA
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Protein sequence | MNLFGVAALS GRLRHRWFGS MLAAACCGLG LLPCVIGAAQ AQGVAAAEPV AAPAERDMAQ WLERMRSAPC HRSYAGTFVV LSANGAMSSA RIWHACDGQR QMERVESLSG TPRTVFRRDD EVRTFLPQQR IVRADRRDAV GLFPPVPPVS GTSVGQFYVS RLMGQERVAG FVADVVWFKP VDTLRFGYRL WSERDTGLAV KLQTLAPDGR VLEQAAFSEL DLNAPVQVDQ LARLMDATAG YKLIAPPVVK TTAKEEGWTL RQPVAGFVPV SCHRRAVSMA DDAPSVLQCL YSDGLASVSL FLEPFDPQHH PARPQISGMG ATQLLAQRVA PDMWVTAVGE VPLSTLRLFA GQLERLR
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