| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3203 |
|---|
| Symbol | |
|---|
| ID | 4691756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3571779 |
|---|
| End bp | 3574643 |
|---|
| Gene Length | 2865 bp |
|---|
| Protein Length | 954 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639850966 |
|---|
| Product | outer membrane protein |
|---|
| Protein accession | YP_997951 |
|---|
| Protein GI | 121610144 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02059] cyanobacterial long protein repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCA CCATCACCAT CGACAAGAAA TTCATCAAAA TCGGTGAGAC CGCCGAGCTC
AAGTTTACTT TCACCAATCC CAATTACTCC CTCTCCCTCG AAAGCCTGAC CGTCCGGACC
GAGGCGTTCG CGATCAACGA AACCATCGCG GGCGGCACCG TACACAGCCT CGTCAATCGT
GGAGTCATCA ATGGTCAGCG TGTCTATACC GCCACATTCA CGCCTACCGC GAACGTGCAA
CGTTCCCTCT ACAGCATCGC CTGCAATGTT GCCGACGACG CCGATTACGC AATCAGCGAC
ATCTTCTCCG TTGACACCGT GCGGCCCACC GTTGTCAATG CCTCGATCGC CAAAAGCGAT
CTGCGCCTCG GGGAAACAAC CACCATCAAC ATCACCTTTA GCGAATCGCT GGCCATTTAC
AACTTCACAC TCGAAGACCT GCAGGTGGAC GCCGGCAAGG GCACTTTGAG CAACCTGCGC
ATCGTCTACT ACGGCGCTGA GCAGGGCTAT TGGCAGGTTG ACCTGCAGGC CCCTACTACC
CGGCCCGCGT CGGGCCTCGA TGGCAATCAG ATACGGATAA ACCTCGCCGG CATCACCGAT
GAAGCAGGCA ACTCAGTCTG GGACAGTCAA CGGAACGGGA CGGGCAACTC TTGGGTGAAC
CTCCCGGCTG TCAGCTACAA CATCGACAAT GGTGTGCTGC CCACGGTCGC CATCACCGGG
CAGCCTGCCA CCACCGTCAA GGGCGGCGAT TCCTTTACCG TCACCTTCAC CTTCAGCGAG
CGCGTCACCG GCTTCGATCT CGACGACGTT CAGTACGACA CCAGCAAAGG CACGCTGAGC
GCTCTGACGG CGGTCGGCAC CGACGGCAGG GTCTGGACCG CCACCTACAC GCCCCGGCCC
AACATCGAGA GCACCGAAAA CACCATCAGC GTGAACCTCG CCGGCGTCCG GGACGCAACG
GACAACGCCG GCGTGGGCAC CAGCAGCAGC GGCAACTTCA GCATCGACAC CAAGCCGCCC
GAGGTCACGG TGACGATCAG CGACAACCGC CTGACCGCTG GCGAAAGCGC CACCGTCACC
TTCACCTTCA GCGAGCGCGT CACCGGCTTC GATCTCAACG ACGTTCAGTA CGACACCAGC
AAAGGCACGC TGGGCGCTCT GACGCCGGTC GGCACCGACG GCAGGGTCTG GATCGCCAGC
TACACGCCCC GGCCCAACAT CGAGAGCGCC GACAACGCCA TCAGCGTGCG CCTCGCCGGC
GTCCGGGACG CGCTGGGCAA CGCCGGGGTG GGCACCGGCA CCAGCGGCAA CTTCACTATC
GACACCCAGG AGGCCTATCT CACCAGCGCC ATGTTTGACA AACAGCGCCT CACCGCTGGC
GAAACCGCCA CCGTCACCCT CACCTTCAAC GAGAGCGTCA GTAACGTCAC CAAAGAGGCC
TTTCAAATCC TCAACGGTTC TGTGAGCGAC CCGACGCCGG TTGCCGGCTC CAACAGCCGC
ATCTGGACAG CCACCTTCAC CCCCACGGCC AACCTGTCGC GCACCAGCAG CTCGATCAGA
ATAAATCTGG ACGGCATCGG AGATCGCGTC GGCAACATCA GCACGGGTGC CGTGTCATTC
AACAACTCCA TCGTCATCGA CACCAAAGTC TTTGTCGTCA ACGACGCCAC GGTGAACGGC
AGGCAATTGG TCTTGCGCTA CAGCGATGAA ACCGCGCTGG ACCCGGAGCA GGCACATACC
GCGCCCAACG ATGCCTTTGT GGTGCTGGTC GGTGGCGTGC GCAACAGCGT CACCGGCGTG
GCCGTGGATG CAGCGGCCAA GACCGTCACG CTGACACTGG AGCGCGCGGT AAGCAAGGGC
CAGCAGGTGA CCGTCGCCTA CAACGACCCC AGCACCGGCA ACGACCTGCA AGCGGTGCAG
GAAGCCGGCA CCGGTACCGC CAGCGGCCAC GACGCGGCCA GTTTTGCGGC CAGGTCGGTG
ACCAACCTCA GCCCGGATAC GACGGGTACG GGTACGGGTA CGGGTACGGG TACGGGTACG
GGAACTGGAA CTGGAACTGG AACTGGAACT GGCACTGGCA CTGGCACTGG CACTGGCACT
GGCACTGGCA CTGGCACTGG CACTGGCACT GGCACTGGCA CTGGCACTGG CACTGGCACT
GGCACGGAAA CCGGGACGGG CACAGGTACA GGTACAGGTA CGAATAGAAC GGACGCCGAC
CGTCGTAAAT CACCCAAGTA CTTTGACGAC GATGCGACGG ATACGCTGGA CTCCGACCAC
GACAGTGTGC CCAACGCCCA GGAGGACCAG GCCCCCGGCC TGCTGCGCCC CGATGGCTCG
GCCGGCCCGG ATGGCGACGG CAACGGCGAC GGTATCCAGG ATAGCCAGCA GGTCGCCGTC
GGCTCGACCC GCGACCTGAC CCTGGTGGCC GGCAGCCAGG ACGGCAAACT GATCCCCGGC
AGCAATGCGC GCATCACCGA ACTGGTGCGC AACGATGCCC CCGCCAGCCT GCCCAAGGGC
ATGGAAATGC CACTCGGTCT GACGCAATTC AGGGTCGGCC TGTCCGAAGG CCGCTACACC
GAGAGCTTCA GCCTGTATGT AGACCCGGCG CTCGGCGTCA ACGGCTACTG GGTCAAGGAC
AGCACCGGCA CCTGGGTGAA CCTGGCCAGC GAACCCTACG GCGGCAAAGT GACCAGCGAA
GGCGGGCGCA CGCGGCTGGA CTTTCAGATC CAGGACGGCG GCCAGTACGA TGCCGACGGG
CTGGCCGACG GCCACATCAC CGCCCTTGGC GCCGCAGCGA AGATGCCGCT GTCCATCGTC
GGGCAGGCGC CGCCCCAGGT CGAGTCGGGC TCCTTCTGGT TCTGA
|
|---|
| Protein sequence | MAATITIDKK FIKIGETAEL KFTFTNPNYS LSLESLTVRT EAFAINETIA GGTVHSLVNR
GVINGQRVYT ATFTPTANVQ RSLYSIACNV ADDADYAISD IFSVDTVRPT VVNASIAKSD
LRLGETTTIN ITFSESLAIY NFTLEDLQVD AGKGTLSNLR IVYYGAEQGY WQVDLQAPTT
RPASGLDGNQ IRINLAGITD EAGNSVWDSQ RNGTGNSWVN LPAVSYNIDN GVLPTVAITG
QPATTVKGGD SFTVTFTFSE RVTGFDLDDV QYDTSKGTLS ALTAVGTDGR VWTATYTPRP
NIESTENTIS VNLAGVRDAT DNAGVGTSSS GNFSIDTKPP EVTVTISDNR LTAGESATVT
FTFSERVTGF DLNDVQYDTS KGTLGALTPV GTDGRVWIAS YTPRPNIESA DNAISVRLAG
VRDALGNAGV GTGTSGNFTI DTQEAYLTSA MFDKQRLTAG ETATVTLTFN ESVSNVTKEA
FQILNGSVSD PTPVAGSNSR IWTATFTPTA NLSRTSSSIR INLDGIGDRV GNISTGAVSF
NNSIVIDTKV FVVNDATVNG RQLVLRYSDE TALDPEQAHT APNDAFVVLV GGVRNSVTGV
AVDAAAKTVT LTLERAVSKG QQVTVAYNDP STGNDLQAVQ EAGTGTASGH DAASFAARSV
TNLSPDTTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT
GTETGTGTGT GTGTNRTDAD RRKSPKYFDD DATDTLDSDH DSVPNAQEDQ APGLLRPDGS
AGPDGDGNGD GIQDSQQVAV GSTRDLTLVA GSQDGKLIPG SNARITELVR NDAPASLPKG
MEMPLGLTQF RVGLSEGRYT ESFSLYVDPA LGVNGYWVKD STGTWVNLAS EPYGGKVTSE
GGRTRLDFQI QDGGQYDADG LADGHITALG AAAKMPLSIV GQAPPQVESG SFWF
|
|---|
| |