Gene Veis_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3187 
Symbol 
ID4691073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3553915 
End bp3554838 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content59% 
IMG OID639850950 
ProductLysR family transcriptional regulator 
Protein accessionYP_997935 
Protein GI121610128 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCA GCGGCATCCA GCCAGCCGAT TTTGGCTTTT TCTCCACACT TGCAACCGCT 
GGCAGCCTGA GCGCTGCTGC TCGTGAATTG GGCATTACGA CGCCTGCGGT CAGCAAGCAT
CTGGCATCGA TGGAGTCGCG CATGGGCGTG ACTTTGGTAA ACCGCACGAC GCGCCGCATG
AGTCTCACCC CGGAGGGAGA GGTGTATTTG GAGCATGCAC GCCGAATCCT CAGCGACATC
GACGGCTTGG AGCAATTGAT CCATGGCGCA ACAACCTCCG CCAGGGGGCT GTTGAGAGTG
AATGCGACAC CCGGTTTCGG CCGCAGTCAT ATCGCGCCCC TCGTTTCAAA GTTCATCTTC
GGGCATCCCG GCGTCGAAGT GCAGCTTCAA CTGTCGGTCA ATCCACCGCC GTTGACCGAG
GACTCGTTCG ATGTCTGCAT TCGTTTTGGT TCACCCCCTG ATGCCCGGGT CATCGCCAGG
CACATCGCCC CCAATCGCCG TCTTCTGTGC GCGTCTCCGG TGTATATCGC CAAGCATGGT
TTGCCCGAAG TTCCGCGCGA CCTGACACGG CATAACTGCA TCGGTATTCG CCAGGGGGAT
GAAGCCTATG GGGTGTGGCG ATTGACAAGT GGCTGCGGTC GATTCAGTAC CACCGAGGTC
GTCAAAACCA GAGGCAACCT GACGACCAAC GACGGCGAAA TAGCGGTGAA TTGGGCACTG
GACGGTCACG GCATTCTGAT GCGCGCCGAG TGGGACATCG AGAGGTATTT GAAGAGCGGA
CGGCTTGTAC AAGTCCTGCC GCAGTGCCAC ACGCCCGATG CGAACATCCA TGCCGTTTAT
CCCAAGCGGC ATCAAAATGC CGGGAGGGTA CGGGCGTTCG TGGAGTTCAT CACCCGCTCC
CTGACGCCGA ACCTTGCCCC TTGA
 
Protein sequence
MSGSGIQPAD FGFFSTLATA GSLSAAAREL GITTPAVSKH LASMESRMGV TLVNRTTRRM 
SLTPEGEVYL EHARRILSDI DGLEQLIHGA TTSARGLLRV NATPGFGRSH IAPLVSKFIF
GHPGVEVQLQ LSVNPPPLTE DSFDVCIRFG SPPDARVIAR HIAPNRRLLC ASPVYIAKHG
LPEVPRDLTR HNCIGIRQGD EAYGVWRLTS GCGRFSTTEV VKTRGNLTTN DGEIAVNWAL
DGHGILMRAE WDIERYLKSG RLVQVLPQCH TPDANIHAVY PKRHQNAGRV RAFVEFITRS
LTPNLAP