Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3080 |
Symbol | |
ID | 4690995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3427547 |
End bp | 3428455 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639850839 |
Product | periplasmic binding protein |
Protein accession | YP_997831 |
Protein GI | 121610024 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.551347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.329322 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGCA TAAGCCATTC GGCCAAGGCC GATCCGATGG ATGCGGAACG TCGCAAGGCA TGTCTGCAGT GGGGACTTCT GGCCGCATGG CCGACAGGGT TGCCAGCCCG GGCCGCCGAT GCGCGTCGCA TCGTCAGCGT AGGCGGGGCA CTGACGGAGA TTGTTTTTGC CTTGCAGGCC AACGCTGATC TGGTCGGGGT GGACACGACT TCGCTGTACC CCGAGTCGGC GCAAAAGCTG CCCAGTGTTG GCTATGCCCG CTCTTTGTCT GTCGAGGGCG TCTTGGCGCT GGCACCCACG CAGGTCATCG CCACCGAGGA TGCCGGGCCG CCGGCCGTGC TTCGGCAACT GTCGGCAGCG GGGATTCCGG TCGCCGTGCT GGCGGCCAAT CACCGCTTTG AAGGTCTGAT CGAGCGGGTC AGACATGTCG GCGCATTGAC CGGGCGAGCG GCCCGGGCCA CGGCGCTGCA ACAGCGCTTG CAGCAAGAGT GGGCGCATGC CCGCGCCCAA GTCACCCGGC GCATGGCCGG GCCTGCCGCG CGGGTATTGT TTGTGCTGGC CCACGCGCCG AACCAGATCC TGGTGGCAGG AACGGACACC AGTGCCCAGG CCATGCTGGA GTATGCGGCC TCGGCCAACG CCATCGACGG GTTTTCGGGG TACAAGCCGT TGACGCCGGA AGCGGTCATC GCCGCGCAGC CCGATATCGT TCTGCTGACG GATCAGGGAC TGAAGGCCGC TGGCGGCGTG ACTGGCATTC TCAAACTGCC GGGGCTGGGG CAAACCCCTG CGGGACACAA GCGCCGGGTG ATTGCACTGG AGGCCATGCT CATGCTGGGA TTCGGGCCGC GCTTGCCTGC GGCGGTGAGC GCTTTGCATG CGGCCATTGA AATGGCGATG CGCGCATGA
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Protein sequence | MRRISHSAKA DPMDAERRKA CLQWGLLAAW PTGLPARAAD ARRIVSVGGA LTEIVFALQA NADLVGVDTT SLYPESAQKL PSVGYARSLS VEGVLALAPT QVIATEDAGP PAVLRQLSAA GIPVAVLAAN HRFEGLIERV RHVGALTGRA ARATALQQRL QQEWAHARAQ VTRRMAGPAA RVLFVLAHAP NQILVAGTDT SAQAMLEYAA SANAIDGFSG YKPLTPEAVI AAQPDIVLLT DQGLKAAGGV TGILKLPGLG QTPAGHKRRV IALEAMLMLG FGPRLPAAVS ALHAAIEMAM RA
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