| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3052 |
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| Symbol | lysS |
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| ID | 4692171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 3404965 |
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| End bp | 3406548 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639850811 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_997803 |
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| Protein GI | 121609996 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.150685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCGA ACGCCTCAGC CTGCGGGCGG TCTTTCATGT CTGACAACCA TCCATCTCCC
CACACCGCCC CGGACGAAAA CCAGCTCATT GCCGAGCGCC GTGACAAGCT GCATGCGCTG
CGCGCCGCGC AAGCCGAAGG CGGCGGCGTT GCCTTTCCGA ACGATTTCAA ACCCTCGCAC
CAGGCCGCGC AGTTGCATCT GGCCCATGGC GCGGCCACGG CGCAGGCGCT GCAAGCCGCT
GCCGTCAGCG TTGGCGTGGC CGGCCGCATG ATGCTCAAGC GCGTGATGGG CAAGGCCAGT
TTTGCCACGC TGCAAGACGG CTCGCTCGGC GCAACGGGCG GGCGTATCCA GTTGTACGTC
ACCAGCGATG CGGTGGGCCA GGCGCGATAC GCCGATTTCA AGCATTGGGA TCTGGGCGAC
ATCGTGGGCG CCGAAGGCAC GCTGATGAAG ACCCGCACGG ACGAGTTGTC GATCAAGGTG
ACCCGGTTGC GGCTGCTGAC CAAGAGCCTG CGCCCGCTGC CCGACAAGTT CCATGGCCTG
GCCGACCAGG AACAAAAGTA CCGCCAGCGC TATGTCGACC TGATCACCGA CGCCCAGGCG
CGCCAGCGCT TCGTGGCACG CAGCAAGGCC GTCAGCGACC TGCGCGAGTT CATGGTGGGC
CATGGCTTTC TGGAAGTCGA AACGCCGATG CTGCACCCGA TACCCGGTGG CGCCAACGCC
CGCCCCTTCG TGACGCACCA CAACGCGCTC GAACAGCAGA TGTACCTGCG CATAGCGCCC
GAGCTGTACC TCAAGCGCCT GATCGTCGGC GGCTTCGAGC GCGTGTTCGA GATCAACCGC
AGCTACCGCA ACGAGGGCAT CTCGGTGCGC CACAACCCCG AGTTCACGAC GCTGGAGTTC
TACGCGGCCT ACTGGAACTA CCTCGATGTG ATGGACTTCA CCGAGACGCT GATCCGCGCC
GTGGCGCTCA AGGCCACAGG CTCGCTGCAA ATGAGCTACC AGGGCCGGGC CGTGGACCTG
GCACAACCGT TTGCGCGCCT GAGCATTCGC GAAGCCATCT TCCAGCACAC CGAGGCCGGC
GCCCATGTCG ATGACGCCGC CTGGCTGATC AGCGCGCTCA AAAAGCTGGG CCGCACGCAA
GAAGCCGACA AGCTCTCAAG CCGCACGCTG GTCAGCCTGC AACTGCTGTA CTTTGAAGAG
ACGGTGGAAG ACAAGCTGTG GCAGCCGACC TTCATCATGG AGCACCCCAC CGAGATCTCT
CCATTGGCGC GCGCCAACGA CCTGCGCCCC GAGGTCACGG AGCGCTTTGA GCTGTACATC
ACCGGCCGCG AATTCGGCAA CGGCTTCAGT GAACTGAACG ACGCCCAGGA GCAGGCCGCA
CGCTTTCACA CCCAAGTGGC CGCCAAGGAC GGCGGCGATG ACGAGGCCAT GTTCCATGAC
CATGACTTCG TGCGCGCGCT CGAATATGGC ATGCCCCCCA CCGGGGGCTG CGGCATCGGC
ATCGATCGCC TGATGATGCT GCTGACCGAC AGCCCCAGCA TCCGGGACGT GATCCTGTTC
CCGGCGCTGC GCAGACAGGT ATGA
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| Protein sequence | MLANASACGR SFMSDNHPSP HTAPDENQLI AERRDKLHAL RAAQAEGGGV AFPNDFKPSH
QAAQLHLAHG AATAQALQAA AVSVGVAGRM MLKRVMGKAS FATLQDGSLG ATGGRIQLYV
TSDAVGQARY ADFKHWDLGD IVGAEGTLMK TRTDELSIKV TRLRLLTKSL RPLPDKFHGL
ADQEQKYRQR YVDLITDAQA RQRFVARSKA VSDLREFMVG HGFLEVETPM LHPIPGGANA
RPFVTHHNAL EQQMYLRIAP ELYLKRLIVG GFERVFEINR SYRNEGISVR HNPEFTTLEF
YAAYWNYLDV MDFTETLIRA VALKATGSLQ MSYQGRAVDL AQPFARLSIR EAIFQHTEAG
AHVDDAAWLI SALKKLGRTQ EADKLSSRTL VSLQLLYFEE TVEDKLWQPT FIMEHPTEIS
PLARANDLRP EVTERFELYI TGREFGNGFS ELNDAQEQAA RFHTQVAAKD GGDDEAMFHD
HDFVRALEYG MPPTGGCGIG IDRLMMLLTD SPSIRDVILF PALRRQV
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