Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3050 |
Symbol | |
ID | 4694666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 3403026 |
End bp | 3404222 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639850809 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_997801 |
Protein GI | 121609994 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.682037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.134859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTTG CCCCCGAGCA CCCGAACTCC AGCGCATTGC CCCTGCGCAG CGGCCCCCAA GGCCCGCTCA GTGGTCTGCG GGTGCTCGAT CTGAGCGCCT ACATCGCCGG GCCCTATGGC TGCGCCTTGC TGGCCGATCA AGGCGCCGAG GTCATCAAGA TCGAGCCGCC CACGGGCGAC AACCTGCGCC AATACCCCTC GACACTGGCG GCCGAGAGCC GCGCCTTCGT CGGCGTGAAC CGCAGCAAGA TCGGCATGGT GCTGGACCTC AAGCAGCCCG CCGACCATGC ATTGCTGATG GCGCTGGTGC GCACGGCCGA TGTGCTGGTG CACAACTTTC GCCCCGGCGT GCCACAGCGC CTGGGCATTG CGTATGAGCA ACTGCGGCCG CTCAATCCAC GCCTCGTCCA TTGCAGCGTC ACCGGCTATG GCGAGAGCGG ACCGCTCAAG GACAAGGCCG GCTATGACCA GGTGCTGCAG ACCATGACCG GCATGTGCAC GCTGCAAGGC AAGCGGGGCC AGCCGCCCGA GATCCTCTAC GGCTCGGTCG TGGACTACCA CGCATCGGCC CTGGTGGCGG CGGGCGTGGC CTCGGCGCTG TACGAGCGCG AGCGCAGCGG CCAGGGCCAG CGGGTGGGCA TCTCGCTGCT GCGCACCGCG CTGGCCATGC AGTCGGCGCG GCTGGTCTGG GCCGAAGGCG AACCCCGGGA CATGGGGCGC GACATGCGTT CGGGCGGCAT CACCGGCATC CACCCGACCA AGGAGGGCTA TCTCTACATC TCAGCCAACA CGCCCCATTT CTGGAGCGCG CTGTGTGACA AGGTGGGCCT GCCCGAACTG GCCGCCAACC AGCGCTACGA CTCGGTGCGC AAACGCGCCC GGCATGTCGC CGAACTCCTG CCCCGGTTGC ACCAAGCCCT GGCGGCACGC AGCGCGCTCG AATGGGAGGC ACTGTTCGGC CAGGCCGTGC CCTGCGCCGC AGCGCGCACC ACAGAAGACA TGTTCGATCA CCCGCAGGTC ATCGCCGAGG ACATGCTGGC CCACTTCACC CACCCGGTGC TGGGCAGCTA CCGGGGCTTC ACACGCGCGA TCCGCTTCGA GCGCACGCCA GGCCCCGATC CATTCGCTGC GCCCACCCTG GGCCAGCATA CCGAGGCCAT GCGTGCCGTA GCCGCCACAG CCGCCACAGG CGCCTGA
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Protein sequence | MPLAPEHPNS SALPLRSGPQ GPLSGLRVLD LSAYIAGPYG CALLADQGAE VIKIEPPTGD NLRQYPSTLA AESRAFVGVN RSKIGMVLDL KQPADHALLM ALVRTADVLV HNFRPGVPQR LGIAYEQLRP LNPRLVHCSV TGYGESGPLK DKAGYDQVLQ TMTGMCTLQG KRGQPPEILY GSVVDYHASA LVAAGVASAL YERERSGQGQ RVGISLLRTA LAMQSARLVW AEGEPRDMGR DMRSGGITGI HPTKEGYLYI SANTPHFWSA LCDKVGLPEL AANQRYDSVR KRARHVAELL PRLHQALAAR SALEWEALFG QAVPCAAART TEDMFDHPQV IAEDMLAHFT HPVLGSYRGF TRAIRFERTP GPDPFAAPTL GQHTEAMRAV AATAATGA
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