Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3001 |
Symbol | |
ID | 4691607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3347693 |
End bp | 3348709 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639850759 |
Product | inner-membrane translocator |
Protein accession | YP_997752 |
Protein GI | 121609945 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.893544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCAGGG CGGGCAGATG GCTGGATATG GGTGAATATG TGGGTGAGGC GGGGCACGAC ACCAACAAAG CAACAAAGGA CTTCTCTATG GACATCTTGC TGCAGCAGAT CATCAACGGT CTAGTCCTTG GCAGCATGTA CGCCTTGATA GCCCTGGGCT ACACCATGGT GTACGGCATC ATCCAACTGA TCAATTTTGC CCACGGCGAG GTGCTGATGA TCGGCGCCCT GACCAGTTGG AGCTGCATCG GCATGATGCA GGCGGCGCTG CCCATGGCAC CGGGTTGGGT ACTGTTGCTG CTGGCCACCA TCAGCGCCGC CACGGTGGCG GCAGCGCTGA ACTTCACGAT CGAAAAAGTC GCCTACCGGC CCCTGCGCAA CAGCCCGCGG CTGGCCCCGC TGATCACCGC CATCGGCATG TCGATCCTGT TGCAGACGCT GGCGATGATC ATCTGGAAGC CCAACTACAA GTCCTATCCG ACGCTGCTGC CCAGCACCCC GTTCGAGATT GGCGGCGCCT ACATCACCCC GACGCAGATC CTGATCCTGG GCGTGACGGT GCTGGCGCTG GCCTCTTTGA TGTACCTGGT GAACCACACC AACCTGGGCC GCGCCATGCG GGCCACGGCA GAAAACCCCC GCGTGGCCGC GCTGATGGGT GTCAAGCCCG ACATGGTGAT CTCGGCCACC TTCATCATCG GCGCCGTTCT GGCGGCCGTC GCCGGCATCA TGCACGCCTC CAACTACGGC ACGGTGCAGC ACACCATGGG CTTTTTGCCG GGCCTGAAAG CCTTCACCGC AGCGGTGTTC GGCGGCATCG GCAATCTGGC CGGTGCAGTG CTCGGCGGCA TCTTGCTGGG CCTGATCGAG GCCATCGGCG CGGGCTACAT CGGCACCCTG ACGGGCGGTC TGCTGGGCAG CAACTACACC GACATCTTTG CCTTCGTCGT GCTCATCGTC ATCCTGACAC TGCGTCCCTC GGGCCTGCTC GGTGAGCGTG TGGCCGATCG CGCCTGA
|
Protein sequence | MGRAGRWLDM GEYVGEAGHD TNKATKDFSM DILLQQIING LVLGSMYALI ALGYTMVYGI IQLINFAHGE VLMIGALTSW SCIGMMQAAL PMAPGWVLLL LATISAATVA AALNFTIEKV AYRPLRNSPR LAPLITAIGM SILLQTLAMI IWKPNYKSYP TLLPSTPFEI GGAYITPTQI LILGVTVLAL ASLMYLVNHT NLGRAMRATA ENPRVAALMG VKPDMVISAT FIIGAVLAAV AGIMHASNYG TVQHTMGFLP GLKAFTAAVF GGIGNLAGAV LGGILLGLIE AIGAGYIGTL TGGLLGSNYT DIFAFVVLIV ILTLRPSGLL GERVADRA
|
| |