| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2952 |
|---|
| Symbol | |
|---|
| ID | 4693397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3300845 |
|---|
| End bp | 3301780 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639850712 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_997705 |
|---|
| Protein GI | 121609898 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3209] Rhs family protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000115352 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGCG TATTGCACTC CGGCTGGCCC CGCCTTCTGG CCCGCGTGGC TCTGCGGCTG
AGTTTTGCAG TTCTTGGGGC CAGCGCGATG GCGCAGACCA CCATCACGTA TTTTCACAAC
GACATTGCCG GCACGCCGAT GATGGCGACC AATGCCAGCG GCGCCGTGAT CTGGAAAGAA
AGCTACCTGC CCTATGGGCA ACGGCAGCAG TTGCCCAACG CCAGCGCCGG CAACAAACTG
TGGTTTACGG GCAAACCCTA TGATGCCAAC ACCGGGCTGT CATACATGGG AGCCCGCTAT
TACATGCCGT TGACCGGGCG CTTTACCGGC ATGGACCCCA AAGACCTGGT GCCAGAGCAG
CCGCACAGCT TCAATCGCTA TGCATATGCA AACAACAATC CCAACAAATA TGTAGACCCC
GACGGCAAGA TTGCCGAGAC GGTGTGGGAT GCCTTTAATC TGGCCCTGGG TTTTCAAAGC
CTCGTCGACA ATGCCCGTGC CGGTAACTGG GCCAATGCGG CTATCGATCT CGCTGGAATA
ACCCTGGATG CTGCGGCCAC CACAGTGCCT GGAGTGCCGG GTGGGGCTTC TACAGGGATC
AAGGCCTATC GGGAGGCTGC AGAGCCCAAA GGGGCGGCAC GGGCATTCCA TGCTTCGCTC
AGAAATTTGC ATCATAACGA GCGCATAGCA AGAATCCGGT CGAAACTTGC TGAGGTGGCA
AAAAACAATG GATGGAAAAA GAATTCGCGT CTTTCACGAA TGAACAAACG CGATGTATAT
GATGCTCCTG ATGGTATTAA GTATTCTGTG GATACATACC ATGGCACATT TGAAAAGATA
GATCGACACG GCAATCACAT GGGCGAGTAT AATATCGACA TGGAACTTAT TCCACACTCC
CTCGACCGAA GTGGCAGACA TAATTTGAGG AAATGA
|
|---|
| Protein sequence | MTSVLHSGWP RLLARVALRL SFAVLGASAM AQTTITYFHN DIAGTPMMAT NASGAVIWKE
SYLPYGQRQQ LPNASAGNKL WFTGKPYDAN TGLSYMGARY YMPLTGRFTG MDPKDLVPEQ
PHSFNRYAYA NNNPNKYVDP DGKIAETVWD AFNLALGFQS LVDNARAGNW ANAAIDLAGI
TLDAAATTVP GVPGGASTGI KAYREAAEPK GAARAFHASL RNLHHNERIA RIRSKLAEVA
KNNGWKKNSR LSRMNKRDVY DAPDGIKYSV DTYHGTFEKI DRHGNHMGEY NIDMELIPHS
LDRSGRHNLR K
|
|---|
| |