Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2932 |
Symbol | |
ID | 4694208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 3281536 |
End bp | 3284295 |
Gene Length | 2760 bp |
Protein Length | 919 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639850693 |
Product | regulatory protein, LuxR |
Protein accession | YP_997686 |
Protein GI | 121609879 |
COG category | [K] Transcription |
COG ID | [COG2909] ATP-dependent transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.104407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGCA GTCTTGCGGT GCCGTCCGGG CGCAGGCCCG AACCGGTCGC CAGCGCCAAG CTGCTTGCGC CGCGCCCGCC GCGCCGGCTG GTGCCGCGCG ATGCGTTGCA GGCGCGGCTG CTGCAAGCCC GGCGCCAGCG CTGCGTGGTC GTGCAGGGGC CCGCAGGCAG CGGCAAGACC AGCACGCTGG TGGCCTGGCG GCAGGCGCTG CTGGCGCTGG ACTTCGACGT GGCCTGGCTG TCCCTTTCGG CCGAGGATTG CGCGCCGGCA CGCTTTTTCG ACTGCCTGCT GGCGAGCATC GGCGCGATCG ATCCCGATGC GGTGCGCGAG GCGGCGCTCC TGCTCGGGCA GGGCAACGAC GATTCGGCGC TCGAGCATGC CGTGATCACC GTCGTGCAGG CCATCGCGTC GCGGCCACGG GAACTGGTGC TGATGCTCGA CGATCTCCAG CACCTGCAAG ACGCCCGCAT CTTCCGGGCG CTGCAGTGGC TGCTCGACTA CGCGCCACCG AAACTGCACC TTGTCCTGAC TTCGCGCAAT GCCCTGCCGC TGTCGTTCGT GCGGCTTCGT TCGCAAGGAC TGGTGAGCGA ATTCGACCTG CGCGACCTGC GCTTTTCCGC CGAAGAAACC GGGCGCTTCC TGCGCGAGCG ACTGGGCAGC ATCGACCTGC GCGACATGCA GGCGCTGCAC GAACTGACCG ACGGCTGGGT GGCGGGCCTG CAACTGTTCG TGCCCGGCTT GCAGGCCGGG CGGGGCGCCG CATACGCCCG GGCGCAGGCG CGTGATGCGC AGGTCTTTGC GCGCTATTTC GAGCGCGAAG TGCTGGCGCA TCTGGCGCAT GAAGACCTGG CACTGCTCAC CAGGATGGCT GTTTGCAACC GTTTCAGTGC CTCCTTGTGC GCCGCGCTGA TGGGGCAGCA GGATGCCGGC GGCATGGCGC TGCGGCTGGC GCGCCTGGAC GGCGGGAACC TGTTCATCAG TCGGGTCGGC GGCCATGGCC GCGACGACTG GTACCGCGTG CATCCGCTCC TGCGGGAGAC ACTGATGGCA CGCTTGGAAA GACGCCCCGG CGCCGAGCGC CGCGCGCTGC ATGGCGCGGC CTGGCGCTGG TTCGAAGCGC ACGGGCATAT CGGCGAGGTT GTGCGCCATG CCGTGCTGGC GGGCGACGCG CACGCGGCGG CGGACATCGT GCAGGCTTGC GCGTCCGACC TGATGGCCCA GGGCGAACTG GCCGCGCTCG GCGGCCTGAT GCGCAGATTG CCCGCAGCGC AGGTGCAGGC GCGTCTTGCG CTGCGGCTGG CTGCGGCCTA CCTGCATATG TACGCGCGCA ACATCCAGGC GCTCGAGAGC GAACTGGCGC AACTGCAGGC GCAGTGGGAC AGCCTGGACA TGCAGCAACA CCACGATATG GCGCTGCTGC GCGGCGGCCT GGCCCTGCAG CGCGACGACA CCGAGGCGCT GCTGGCGCTC GCGCCGCAGC TTCGGGCCAT CCCGGACGAC AGGCCGCCCC TCTTTGCCGG GCGCTGCCAC CTGTTGGCCT GGATGCTGAT GCACCGCGAC GCATACGGCC AGGCCCGCGT GCTGCTGGAC CAGGCCGCGC AGCAACGAGG CAGCGCGCCG GCGCGTCGTC TGATCGGGCG CTGCTTGGCC GGCATGAGCT ACGCGCTCGA AGGCCGCATG ACCGAGGCCG AGCAACTGCT GCGCGAGGTT CTGCAAGAGG CGCAAGGGCA AGGCGCGGCC AGGATCGGGG TGGCCAGCAT GGCGGCGGGC CTGCTGAGCG ACATGCTCTA CGAGTGCAAC GAACTCGAAG CCGCCTGCAG CCTGCTCGAA CCCCGCATCG AAGTGCTCGA GCGCGCCTCG ATTCCCGATG CGGTGCTGCG CGCCTTCGTC GTCTTGGCAT GTGCGCACTG GCTGACGGGC CGGCGCCTGC AAGCGCTCGG CCACCTCCAG CGCCTGGAAG ACTACGCCGC GCGCAACGGG CTCGACCGCC TGCTCGCACA TGCGCTACGG CTGCGCATGC GCCTGCACCT CAAGCAAGGC CAGACCATGC AGGCCGACAT GGTGTTCGGG CGGATCGAGG TGCTCGGCGC ACGGCACGCC GGGGCCGGCA AGGGCACGGC AGCCGAGACC TGGCGCACCA CCGAGCGCGC ACGCGCCGAC ATGCGCCTGC ACTGGAACGA CTTCGGCGCC GCCGTCGACT GCCTCGGAGC GCTCGTGCAG CGCACGGCTT CGGCCGGCCG GCTGCGCACC CTGGCGGCCC TGCAGTTGCA ACTGGCCGTT GCGGAATCGG GGCGCGGCAA CCAGCAGGGC GCGCGCCACC AGGCCATCGA AGCCCTGCGC CTGGGCCATC GGCTCGGGTT GGTGCGCAGC CTGCTGGACG TGTCGACGAA CGTGCCAGCG CTGCTCGATG CGCTGCTGGC GGATGCGGTG CCCGATCCGG TTCTCGCGTT CTATGCACGG CGGCTGCTGG ATGCAGCCGC AGCCACGCGG CGCATGGGTG CGGCCAGCGG CGGCGCAACG GACGCCGCAG CCGAAGGCAG CGCCGCCGAT TTGCTCAACG CGCGCGAGCG CGAGGTGCTC AGCCTCGTGG CGCAGGCCAT GCCGAACAAG AAGATCGCTC GCGTGCTGGG CGTCACACCG CACACCGTGA AGTGGCATCT GCGCAAGGTC TACAGCAAAC TGGGCGTCGC CGAGCGCGGC GAAGCGGTCG CGCGCATGCG CGATCTCGCG CTGCCTCGGG AAACCCCCAG GTCCCGCTGA
|
Protein sequence | MSRSLAVPSG RRPEPVASAK LLAPRPPRRL VPRDALQARL LQARRQRCVV VQGPAGSGKT STLVAWRQAL LALDFDVAWL SLSAEDCAPA RFFDCLLASI GAIDPDAVRE AALLLGQGND DSALEHAVIT VVQAIASRPR ELVLMLDDLQ HLQDARIFRA LQWLLDYAPP KLHLVLTSRN ALPLSFVRLR SQGLVSEFDL RDLRFSAEET GRFLRERLGS IDLRDMQALH ELTDGWVAGL QLFVPGLQAG RGAAYARAQA RDAQVFARYF EREVLAHLAH EDLALLTRMA VCNRFSASLC AALMGQQDAG GMALRLARLD GGNLFISRVG GHGRDDWYRV HPLLRETLMA RLERRPGAER RALHGAAWRW FEAHGHIGEV VRHAVLAGDA HAAADIVQAC ASDLMAQGEL AALGGLMRRL PAAQVQARLA LRLAAAYLHM YARNIQALES ELAQLQAQWD SLDMQQHHDM ALLRGGLALQ RDDTEALLAL APQLRAIPDD RPPLFAGRCH LLAWMLMHRD AYGQARVLLD QAAQQRGSAP ARRLIGRCLA GMSYALEGRM TEAEQLLREV LQEAQGQGAA RIGVASMAAG LLSDMLYECN ELEAACSLLE PRIEVLERAS IPDAVLRAFV VLACAHWLTG RRLQALGHLQ RLEDYAARNG LDRLLAHALR LRMRLHLKQG QTMQADMVFG RIEVLGARHA GAGKGTAAET WRTTERARAD MRLHWNDFGA AVDCLGALVQ RTASAGRLRT LAALQLQLAV AESGRGNQQG ARHQAIEALR LGHRLGLVRS LLDVSTNVPA LLDALLADAV PDPVLAFYAR RLLDAAAATR RMGAASGGAT DAAAEGSAAD LLNAREREVL SLVAQAMPNK KIARVLGVTP HTVKWHLRKV YSKLGVAERG EAVARMRDLA LPRETPRSR
|
| |