| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2900 |
|---|
| Symbol | |
|---|
| ID | 4693480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3242593 |
|---|
| End bp | 3244137 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639850661 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_997654 |
|---|
| Protein GI | 121609847 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.473738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0138886 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC TTGCCGGCGG AGCGCAGCGC CACCCGGTTG CCGCGCGCCT GGAGCGCCTG
CCGATGACCG GCTATCAGCG CCGCTTGTTC GCCATCATCG CGGCGGCCTG GTTTTTCGAT
TCGATGGACC TGGGCATCAT GACTTTCGTG CTCGGCTCGA TCCAGGCGGA GTTTGCTTTG
ACGCCGGCGC AGACCGGGCT GCTGGCGAGC AGCAGTTTCG TCGGCATGTT CTTCGGCGCG
GCCACGGCGG GTCTGCTGGC CGACAAGTTC GGGCGCAAGC CGGTGTTTCA GCTCAGCATG
GTCTTCTGGG GCGCGGGCAG CCTGATGTGC GGCCTGTCGC ACACCGTCGA TGAGTTGATG
CGCTACCGGG TGCTGCTCGG CTTTGGCATG GGCATGGAAT TCCCGATCGG CCTAGTGTCG
CGTCACCGAT CATCTGTCGG TCTGCGCTGG CCATCGAAGC GCATCGCGGC GTTGCATCGC
TTGCCAATAC GCTCGGTATG GGCTGCGCGA TGCGCCTTGC GCTGCGCTCC GATGGCTGCG
CGCAGCCTAC GACATCTGAT CGGTGACGCG ACACTAGCGC TGGTCTCGGA GATCGTGCCC
GCCAAAAGCC GTGGCCGCTA TGTCGCCATC CTGGAGGGCT TCTGGCCGCT GGGTTTTATC
GCGGCCGGTG TGGGCGCCTA CCTTTGCCTG CCATCGATAG GCTGGCGCGG CATCTTCATC
GCGCTGGCCG TGCCGGCGGT TTTCGTGTTC GTCGTGCGCC GCTTCGTGCC CGAGTCGCCG
CGCTGGCTGG AGGACGCCGG CCGGTTCAGC GAGGCCGACG CGGTCACCAG CGGCTTCGAG
CAACGGGTGC TGCTCGCCTC GGGCCGGCAG ATGCTGGCGC CGGTGTCCAC GGCATCGGGC
CATCGGGCGC CGCCAGCGCC ACGGCGGGTG CCGTTCGCCG AGCTTTGGCA AGGGGTCTAC
GCGCGCCGCA CCGTGATGCT ATGGGCGCTG TGGCTGTTCG CGCTGCTGGG CTACTATGGC
CTGACGACCT GGCTTGGCGC GCTGCTGCAG CAGGCCGGCT ACGAGGTCGC GAAGTCGGTG
CGCTACACCG TGCTGATCTC GCTGGCGGGT ATTCCGGGGT TCATCTTTTC GGCCTGGCTG
CTGGAAGCCT GGGGCCGCAA GCCGACCTGC GTGCTGATGC TGGCCGGCAG CGCGATCGCC
GCGTACTGCT ACGGCCAGGC GGCGGCGAGC CATGCGCCGG TTGCGCAACT GATCATTGCC
GGGCTGTGCA TGCAGTTCTT CCTGTTCGGC ATGTGGTCCG TGCTGTACGC CTACACGCCG
GAGTTGTACC CGACGCGCTC GCGCGCCACG GGCGCCGGCT TCGCCTCGTC GGTGGGCCGC
GTCGGCTCTC TCGCCGGGCC TTACCTCGTC GGCCTGCTGC TGCCGGTGGC GGGGCAGGCC
GGCATCTTCA CGCTCGGGGC GGCATCGTTC GTCGTGGCGG CCGGGGTCGT GGCCCTGCTG
GGGGTGGAGA CCAAGGGGCA ATCGCTCGAG GAGCTCTCGC ATTGA
|
|---|
| Protein sequence | MNALAGGAQR HPVAARLERL PMTGYQRRLF AIIAAAWFFD SMDLGIMTFV LGSIQAEFAL
TPAQTGLLAS SSFVGMFFGA ATAGLLADKF GRKPVFQLSM VFWGAGSLMC GLSHTVDELM
RYRVLLGFGM GMEFPIGLVS RHRSSVGLRW PSKRIAALHR LPIRSVWAAR CALRCAPMAA
RSLRHLIGDA TLALVSEIVP AKSRGRYVAI LEGFWPLGFI AAGVGAYLCL PSIGWRGIFI
ALAVPAVFVF VVRRFVPESP RWLEDAGRFS EADAVTSGFE QRVLLASGRQ MLAPVSTASG
HRAPPAPRRV PFAELWQGVY ARRTVMLWAL WLFALLGYYG LTTWLGALLQ QAGYEVAKSV
RYTVLISLAG IPGFIFSAWL LEAWGRKPTC VLMLAGSAIA AYCYGQAAAS HAPVAQLIIA
GLCMQFFLFG MWSVLYAYTP ELYPTRSRAT GAGFASSVGR VGSLAGPYLV GLLLPVAGQA
GIFTLGAASF VVAAGVVALL GVETKGQSLE ELSH
|
|---|
| |