Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2817 |
Symbol | |
ID | 4690639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3164893 |
End bp | 3167166 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639850579 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_997573 |
Protein GI | 121609766 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.280342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAATTT TCAATAAAGT CACCAAGACT TTCCAATGGG GTGACCAGAC CGTCGTCATG GAGACCGGCG AAATCGCCCG CCAGGCCAGC GGCGCGGTGC TGGTGAGCAT CGACGACACC GTGGTGCTGG CCACCGTGGT CGCGTCCCGT TCGATCAAGC CCGGCCAGGA CTTCTTCCCG CTGACGGTGG ACTACATCGA GAAGACCTAC GCTGCGGGCA AGATCCCCGG CAGTTTCTTC AAGCGCGAAG CCAAGCCCAG CGAGCATGAA ACGCTGACCA GCCGCCTGAT CGACCGGCCG CTGCGCCCGC TGTTCCCGCA GGGCTTTTTC AATGAGGTGC ATCTGGTCAT CCACACCTTG TCGCTGAACC CCGAGGTCGA CGCCGACATC GCCGCGCTGA TCGCCAGCAG TGCCGCGCTG GCGCTCTCCG GCATTCCGTT CAATGGCCCG ATCGGGGCTG CGCGCGTGGG TTACATCCAG GGCGAGTACC GGCTCAATCC CGGCCCCACG GCGCGCAAAA GCTCGCAGTT GGATCTGGTG GTGGCCGGCA CCGAAGCGGC GGTGCTGATG GTCGAATCCG AGGCGCAGCA ATTGTCCGAA GAGATCATGC TCGGCGCCGT GGTGTTCGGC CATCAGCAAG GCAAGGTGGC GATCGATGCC ATCCACGAGT TGGTGCACGC AGCCGGCAAG CCGGTGTGGC AATGGGAAGC GCCGGCCAGG GATGAGGCGC TGATCGCCCG GGTGGCGGCG CTGGCGGACG ACAAGCTGCG CGCGGCCTAC CAGATTCGCA ACAAGCAGGC CCGCACCGAG GCTTGCCGTG CAGCCTATGC GGCGGTGCTG GCGCAGTTGC AAGCCGATGG CGTCGAATGC GACACCGTGA AGGCCGAGGG CCTGCTGTTC GACATCGAAG CGGGCATCGT GCGCAGCCAG ATACTGGCCG GCGAGCCGCG CATCGACGGC CGTGACACGC GCACCGTGCG CCCCATCGAG ATCCGCGCCG GCGTGCTGCC CCGGGCCCAT GGCTCGGCGC TGTTCACGCG CGGCGAAACC CAGGCCCTGG CGGTGGCCAC GCTGGGCACC GAGCGCGATG CGCAGCGCAT CGACGCGCTG GCCGGCGAGT ACGATGACCG CTTCATGCTG CACTACAACA TGCCGCCCTT TGCCACCGGC GAAGTGGGGC GCATGGGTTC GACCAAGCGC CGCGAAATCG GCCATGGCCG TCTGGCCAAG CGGGCGCTGG TGGCGGTGCT GCCGACCAAG GAGGAGTTTC CCTACACCAT GCGCGTGGTC TCGGAGATCA CCGAATCCAA TGGCTCCTCG TCGATGGCCT CGGTCTGCGG GGGCTGCCTG TCGCTGATGG ACGCGGGCGT GCCGATGAAG GCGCATGTGG CGGGTATCGC AATGGGCCTG ATCAAGGATG GCAACCGCTT TGCGGTGCTG ACCGACATTC TGGGCGACGA AGATCACCTC GGGGACATGG ACTTCAAGGT GGCCGGCACC ACGGCGGGCA TCACGGCATT GCAGATGGAC ATCAAGATCC AGGGCATCAC CCGGGAGATC ATGCAGGTGG CGCTGGCGCA GGCCAAGGAA GCGCGCATGC ATATCCTGGG CAAGATGCAG CAAGCCATCG GCCAGGCCAA GACCGAGGTG TCGAACTTTG CGCCCAAGCT GTACACGATG AAGATCAACG CCGAGAAAAT CCGCGACGTG ATCGGCAAGG GCGGCGCCGT GATCCGGGCG CTGACCGAAG AAACCGGCTG CCAGATCAAC ATCGAGGAGG ACGGCACGAT CACCATCGCC GCGACCGACG CCGCCAAGGC CGACATCGCC AAGCGCCGCA TCGAGCAGAT CACCGCCGAG ATCGAGATCG GCAAGATCTA CGAAGGCCCG GTGACCAAGC TGCTGGACTT CGGCGCGCTG ATCAACCTGC TGCCCGGCAA GGACGGGCTG CTGCACATCA GCCAGATCGC CCACGAGCGC GTCGAGAGGG TGTCCGATTA CCTGAGCGAA GGCCAGATCG TGCGGGTCAA GGTGATGGAA GCCGACGAAA GGGGTCGCGT CAAGCTGTCG ATGAAGGTGC TGGCCGAACG CCCTGCCCCG GGCAGCGACC GTTTCGGCAC AGGCAGCGAG CGCCCTGCGC CGGGCAGCGA CCGTCCGGCA CTGGCCGAAC GCGAGCCGCG GCGTGAGATG CGCGACCATG GCCATCCGCC ATCGGAGCAA CAGCAGCAGC AATCGCCGCC CGCCGATACC GGCTCCGGGC AGCGCGTCGG CTGA
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Protein sequence | MGIFNKVTKT FQWGDQTVVM ETGEIARQAS GAVLVSIDDT VVLATVVASR SIKPGQDFFP LTVDYIEKTY AAGKIPGSFF KREAKPSEHE TLTSRLIDRP LRPLFPQGFF NEVHLVIHTL SLNPEVDADI AALIASSAAL ALSGIPFNGP IGAARVGYIQ GEYRLNPGPT ARKSSQLDLV VAGTEAAVLM VESEAQQLSE EIMLGAVVFG HQQGKVAIDA IHELVHAAGK PVWQWEAPAR DEALIARVAA LADDKLRAAY QIRNKQARTE ACRAAYAAVL AQLQADGVEC DTVKAEGLLF DIEAGIVRSQ ILAGEPRIDG RDTRTVRPIE IRAGVLPRAH GSALFTRGET QALAVATLGT ERDAQRIDAL AGEYDDRFML HYNMPPFATG EVGRMGSTKR REIGHGRLAK RALVAVLPTK EEFPYTMRVV SEITESNGSS SMASVCGGCL SLMDAGVPMK AHVAGIAMGL IKDGNRFAVL TDILGDEDHL GDMDFKVAGT TAGITALQMD IKIQGITREI MQVALAQAKE ARMHILGKMQ QAIGQAKTEV SNFAPKLYTM KINAEKIRDV IGKGGAVIRA LTEETGCQIN IEEDGTITIA ATDAAKADIA KRRIEQITAE IEIGKIYEGP VTKLLDFGAL INLLPGKDGL LHISQIAHER VERVSDYLSE GQIVRVKVME ADERGRVKLS MKVLAERPAP GSDRFGTGSE RPAPGSDRPA LAEREPRREM RDHGHPPSEQ QQQQSPPADT GSGQRVG
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