Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2785 |
Symbol | |
ID | 4691183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3132778 |
End bp | 3133563 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639850546 |
Product | 4-oxalocrotonate decarboxylase |
Protein accession | YP_997541 |
Protein GI | 121609734 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.197083 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCCAC AAAAAATCCA GCGCCACGGC GACGAGCTGT ACCAATCGCT GCTCAGCCGC CAGCCCGTGG CGCCGCTGAC CGAGCGCGAG CCGGGCATCA CCATCGACGA CGCCTACCAG ATCCAGTTGC GCATGATCCA GCGCCGCCTC GACGCCGGCG AGCGCGTCGT GGGCAAGAAG ATCGGCGTGA CCAGCCAGGT CGTGATGGAC ATGCTGGGTG TGAACCAGCC CGACTTCGGC CACCTGCTCT CGGGCATGGT GTTCAACGAA GGCCAGCCGC TGAGCATGGC CCAATTCATC GCGCCCAAGG CCGAGGCCGA GGTGGCCTTC ATCCTCGCGC GCGACCTCGA AGGCCCGGGC GTGACCGCCG CCGACGTGCT GCGCGCCACC GACTGCGTGA TGCCCTGCTT CGAGATCGTG GACAGCCGCA TCGAGGACTG GAAGATCAAG ATCCAGGACA CCGTGGCCGA CAACGCCTCC TGCGGCGTGC TCACGCTCGG TGGCCTGCGC CGCAGCCCGC GCGACATCGA CCTCGCCCTG GCCGGCATGG TGCTGGAGAA GAACGGCGAG ATCGTCAGCA CCTCGTGCGG CGCCTCGGTG CAGGGCTCGC CCGTCAACGC CGTGGCCTGG CTGGCCAACA CGCTGGGGCG GCTGGGCATA GGCCTCAAGG CCGGCGACAT CATCCTCTCG GGCTCGCAGT CGCCCCTGGT GCCGGTGGTG GCGGGCGACA GCCTGTATTG CACGGTCGGT GGACTGGGCG GTACTTCCGT CCGGTTTGTG GCTTGA
|
Protein sequence | MDPQKIQRHG DELYQSLLSR QPVAPLTERE PGITIDDAYQ IQLRMIQRRL DAGERVVGKK IGVTSQVVMD MLGVNQPDFG HLLSGMVFNE GQPLSMAQFI APKAEAEVAF ILARDLEGPG VTAADVLRAT DCVMPCFEIV DSRIEDWKIK IQDTVADNAS CGVLTLGGLR RSPRDIDLAL AGMVLEKNGE IVSTSCGASV QGSPVNAVAW LANTLGRLGI GLKAGDIILS GSQSPLVPVV AGDSLYCTVG GLGGTSVRFV A
|
| |