Gene Veis_2785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2785 
Symbol 
ID4691183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3132778 
End bp3133563 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content68% 
IMG OID639850546 
Product4-oxalocrotonate decarboxylase 
Protein accessionYP_997541 
Protein GI121609734 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID[TIGR03220] 2-oxopent-4-enoate hydratase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.197083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCAC AAAAAATCCA GCGCCACGGC GACGAGCTGT ACCAATCGCT GCTCAGCCGC 
CAGCCCGTGG CGCCGCTGAC CGAGCGCGAG CCGGGCATCA CCATCGACGA CGCCTACCAG
ATCCAGTTGC GCATGATCCA GCGCCGCCTC GACGCCGGCG AGCGCGTCGT GGGCAAGAAG
ATCGGCGTGA CCAGCCAGGT CGTGATGGAC ATGCTGGGTG TGAACCAGCC CGACTTCGGC
CACCTGCTCT CGGGCATGGT GTTCAACGAA GGCCAGCCGC TGAGCATGGC CCAATTCATC
GCGCCCAAGG CCGAGGCCGA GGTGGCCTTC ATCCTCGCGC GCGACCTCGA AGGCCCGGGC
GTGACCGCCG CCGACGTGCT GCGCGCCACC GACTGCGTGA TGCCCTGCTT CGAGATCGTG
GACAGCCGCA TCGAGGACTG GAAGATCAAG ATCCAGGACA CCGTGGCCGA CAACGCCTCC
TGCGGCGTGC TCACGCTCGG TGGCCTGCGC CGCAGCCCGC GCGACATCGA CCTCGCCCTG
GCCGGCATGG TGCTGGAGAA GAACGGCGAG ATCGTCAGCA CCTCGTGCGG CGCCTCGGTG
CAGGGCTCGC CCGTCAACGC CGTGGCCTGG CTGGCCAACA CGCTGGGGCG GCTGGGCATA
GGCCTCAAGG CCGGCGACAT CATCCTCTCG GGCTCGCAGT CGCCCCTGGT GCCGGTGGTG
GCGGGCGACA GCCTGTATTG CACGGTCGGT GGACTGGGCG GTACTTCCGT CCGGTTTGTG
GCTTGA
 
Protein sequence
MDPQKIQRHG DELYQSLLSR QPVAPLTERE PGITIDDAYQ IQLRMIQRRL DAGERVVGKK 
IGVTSQVVMD MLGVNQPDFG HLLSGMVFNE GQPLSMAQFI APKAEAEVAF ILARDLEGPG
VTAADVLRAT DCVMPCFEIV DSRIEDWKIK IQDTVADNAS CGVLTLGGLR RSPRDIDLAL
AGMVLEKNGE IVSTSCGASV QGSPVNAVAW LANTLGRLGI GLKAGDIILS GSQSPLVPVV
AGDSLYCTVG GLGGTSVRFV A