| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2589 |
|---|
| Symbol | |
|---|
| ID | 4693518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2929543 |
|---|
| End bp | 2930169 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639850355 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_997352 |
|---|
| Protein GI | 121609545 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3707] Response regulator with putative antiterminator output domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0488842 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGG CTTTGCGCAT CGTGGTGGTG GCCCCGGATC TGGCCGTTGC CGACCCTGAG
GACGAACATG CCCTGCAGCA GGCCGAGCGC GCGCGGGCGC TGCACATCGG GCTGCTGGAA
AACAACTTCA ACCTGGTGGC CACGCTGCCC GCCGATGTCT TTCTGAGCGA GCGGATCGCC
CAGTTGCAGC CCGACCTGAT CATCGTCGAC GCCGAGAGCG ATGCGCGCGA TGCGCTCGAG
CATGTGGTGC TGGCCACTCG CGATGCCCGC CGGCCCATCG TGCTGTTCAC CAACGACGAG
GACCGCGCGC TGGTCAAGGA CGCGGTGGCC GCCGGCGTCT CGGCCTACAT CGTGGCCGGC
CTGTCCACGC AACGCATCCG CCCGATTCTG GATGTGGCGC TGGCGCGCTT TCAGCACGAA
CAGGCGCTGC GCGCCGAACT GGCCGATGCC CGCACGGCCT TGCGTGAGCG CAAGACCATA
GACCGCGCCA AGGGTCTGCT GATGCAGCGC CAGGGCCTGA GCGAACAGGC GGCCTACGAA
AAGCTGCGCA AATCGGCGAT GGACAAGGGC CTCAAGCTCG GCGATGTGGC CCAGCGCATG
CTCGACGCGA TGGAATTGCT GGGCTGA
|
|---|
| Protein sequence | MNQALRIVVV APDLAVADPE DEHALQQAER ARALHIGLLE NNFNLVATLP ADVFLSERIA
QLQPDLIIVD AESDARDALE HVVLATRDAR RPIVLFTNDE DRALVKDAVA AGVSAYIVAG
LSTQRIRPIL DVALARFQHE QALRAELADA RTALRERKTI DRAKGLLMQR QGLSEQAAYE
KLRKSAMDKG LKLGDVAQRM LDAMELLG
|
|---|
| |