| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2575 |
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| Symbol | |
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| ID | 4691250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 2909232 |
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| End bp | 2910674 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639850341 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_997338 |
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| Protein GI | 121609531 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00303774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTGAAGC CGGCACCCGT CCAGCGCCCG GGCGCGCAGA CCCTGGCCGA TTTGTGCCGC
CGCTACGGCG CTGCGTTCAG CGCAGCCTGG CGCCAGCGCG ATCAGATGCA GCCTGTCGAA
CGCCTGCCCC ATGAGGCGCA GTTCTTGCCG GCCGCGTTGT CGCTGCAGGA GACGCCGGTC
TCGCCCGCGC CGCGTGTCGC GCTGTGGCTG CTGATCGGCT TTGCCTCGCT GGTGCTGCTG
TGGGCCAGCT TTGGACATAT CGATGTGGTG GCCACGGCGC AGGGCAAGGT GGTGCCCAAC
GACCGCACCA AGACCATCCA GCCTTTCGAG ACCGCCACCG TCAAGGCCAT CCACGTCACC
GATGGCCAAC AGGTCAACGC CGGGGACGTG TTGATCGAGC TCGATGCCAC CAGTGCGCAA
GCGGAGCAGG AACGGGTGCA GGGCGACTTG GCGGCGGCCA GACTGCAAGT GGCGCGCGGC
CAGGCCATGC TGGCGGCGTT GGACAGCGGG CGCGCGCTGC GGCTGAACTG CCCGGCGCGG
GTCGATGACG CCCGGTGCAC CCAAGCCCGG CTGCTGCTGG CCGGGCAGAT GGCCGAATAC
AGCGCCAGGC AAAGCCGCAT CGAAGCCGAA ACGGCCAAGC GCGAAGCCGA ACTGCGCGGG
GTTCGGGAGT TGGTGCACAA ATTGGAGCAG ACGGTGCTGA TTGCCAAACA ACGCGAGCAG
GACTTCCGGC ACCTGCTCGA TCAGGACTTC GTCTCCAAGC ACGGCTATCT GGAGCGCCAG
CAGGCGCATA TCGAGCAAGA AGCCGATCTG GCCCATCTGC GCAACCGCCT GCAAGAGATC
GAGGCCGCGC TGCGCGAAGC CCATGGCCAG CGCGAGGCAT CGATGGCCGA GGCCCGGCGC
GCGAGCCTGG ACAGCATCAC CGACGGCCAG CAAAAAGCCG CAGCGCTGGA GCAAGACCTG
CTGCGGGCCG ATGTGCGCGG CCGGCTGATG CAATTGATCT CGCCGGTGGA CGGCACCGTG
CAACAACTGG CGCTGCACAC GCTCGGTGGT GTGGTCACGC CGGCGCAGCC GGTGATGCTG
ATCGTGCCGC GCGACAACGC GCTGGAGGTC GAAGCCTTTC TGGAGAACAA GGACATCGGC
TTCGTCAAAC CGCAGCAGGA TGCCCAAGTG AAGATCGAGA CGTTCCAGTA CACCAAGTAC
GGCACCATCC GCGCCAAGGT CGCATCGGTC TCGCATGACG CGATCAACGA CGACCGGCGC
GGTCTGATCT ACTCGACCCG GGTCCGGATG GAAAAGGCCA GCATCGATGT GGACGGCCAG
CCCGTTCGCC TGAGCCCCGG CATGGCCGTT TCGGTGGAGA TCAAAACCGG CAAGCGGCGG
GTGATCGAAT ATTTCCTGTC GCCACTGATG CAGCACACCA GCGAGAGTTT GCGCGAGCGC
TGA
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| Protein sequence | MLKPAPVQRP GAQTLADLCR RYGAAFSAAW RQRDQMQPVE RLPHEAQFLP AALSLQETPV
SPAPRVALWL LIGFASLVLL WASFGHIDVV ATAQGKVVPN DRTKTIQPFE TATVKAIHVT
DGQQVNAGDV LIELDATSAQ AEQERVQGDL AAARLQVARG QAMLAALDSG RALRLNCPAR
VDDARCTQAR LLLAGQMAEY SARQSRIEAE TAKREAELRG VRELVHKLEQ TVLIAKQREQ
DFRHLLDQDF VSKHGYLERQ QAHIEQEADL AHLRNRLQEI EAALREAHGQ REASMAEARR
ASLDSITDGQ QKAAALEQDL LRADVRGRLM QLISPVDGTV QQLALHTLGG VVTPAQPVML
IVPRDNALEV EAFLENKDIG FVKPQQDAQV KIETFQYTKY GTIRAKVASV SHDAINDDRR
GLIYSTRVRM EKASIDVDGQ PVRLSPGMAV SVEIKTGKRR VIEYFLSPLM QHTSESLRER
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