Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2571 |
Symbol | |
ID | 4692939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2904708 |
End bp | 2905607 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639850337 |
Product | SMP-30/gluconolaconase/LRE domain-containing protein |
Protein accession | YP_997334 |
Protein GI | 121609527 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.233694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0110739 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCC TGCCGCTGCC ACCGTCCGAA CTCGGCGAGT CGCCGTTCTG GCATCCGCAT GAAAAACGCC TCTACTGGTG CGACATCCAA GGGTTTGCGC TGCATGCCTG GGAGCCTGCC ACGGGCCGGA GCTGGCGATG GGAAATGCCC GCCGAGCCTG GCTGCTGCGC ACCGGCGCCG GACCGGCACT GCGTAATCGG ATTACGTGAC GGCTTTCATC TGCTGGACAC GGCCAGTGGC GCCCTGCGCT GCCTGGCCCC GTTGCCGGCC GCCCGGCACG ACCCCCGGCG GCTGCGCCTG AACGATGGTC GCTGCGACAC CGCAGGCCGG TTCTGGGCCG GCTCGATGGT CACGCCGCGC ACCGCGCCCG ATGCCGCGCT GTGGCGGCTG TCGGCCGGCG CCGGCGGCTA TCGCCTGGAG CAGATGGCGG GCGACAACTT CACCGCCAAC GGCCTGGCTT TCAGCCCCGA CGACCGGTTC ATGTACTGGT CCAACACCCC CGAGCACCGT ATCGACCGGT TTGACTTCGA TGCCGCCACC GGAGCCATCG GCAAGCGCCA GCCCTGGGCG CATTTTGCCC GCAAGGAACC CGGCCAGCCC TACGGCGGCC GCCCCGATGG CGCAGCGGTG GACCGCCAAG GCAACTACTG GGTGGCCATG TACGAGGGCG CCTGCGTGCT GCAACTCGCG CCCACCGGCG CGGTATTGCA GCGCATCGCG ACCCCGGTGC AATGCCCCAC CATGGTGTGC TTCGGCGGGG AAGATCTGCG CACGCTGTAC ATCACCTCGG CCCGCGCGGG GCGGCCCGAG CAAGAGCGCA ATGCCAGCCC TGCGGCAGGC TGCCTGTTCA GCACCCGGGT CGAAGTGCCG GGGCTGGCGG TCAACTTCTT CAAGCCATGA
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Protein sequence | MQTLPLPPSE LGESPFWHPH EKRLYWCDIQ GFALHAWEPA TGRSWRWEMP AEPGCCAPAP DRHCVIGLRD GFHLLDTASG ALRCLAPLPA ARHDPRRLRL NDGRCDTAGR FWAGSMVTPR TAPDAALWRL SAGAGGYRLE QMAGDNFTAN GLAFSPDDRF MYWSNTPEHR IDRFDFDAAT GAIGKRQPWA HFARKEPGQP YGGRPDGAAV DRQGNYWVAM YEGACVLQLA PTGAVLQRIA TPVQCPTMVC FGGEDLRTLY ITSARAGRPE QERNASPAAG CLFSTRVEVP GLAVNFFKP
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