Gene Veis_2571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2571 
Symbol 
ID4692939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2904708 
End bp2905607 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content70% 
IMG OID639850337 
ProductSMP-30/gluconolaconase/LRE domain-containing protein 
Protein accessionYP_997334 
Protein GI121609527 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.233694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0110739 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCC TGCCGCTGCC ACCGTCCGAA CTCGGCGAGT CGCCGTTCTG GCATCCGCAT 
GAAAAACGCC TCTACTGGTG CGACATCCAA GGGTTTGCGC TGCATGCCTG GGAGCCTGCC
ACGGGCCGGA GCTGGCGATG GGAAATGCCC GCCGAGCCTG GCTGCTGCGC ACCGGCGCCG
GACCGGCACT GCGTAATCGG ATTACGTGAC GGCTTTCATC TGCTGGACAC GGCCAGTGGC
GCCCTGCGCT GCCTGGCCCC GTTGCCGGCC GCCCGGCACG ACCCCCGGCG GCTGCGCCTG
AACGATGGTC GCTGCGACAC CGCAGGCCGG TTCTGGGCCG GCTCGATGGT CACGCCGCGC
ACCGCGCCCG ATGCCGCGCT GTGGCGGCTG TCGGCCGGCG CCGGCGGCTA TCGCCTGGAG
CAGATGGCGG GCGACAACTT CACCGCCAAC GGCCTGGCTT TCAGCCCCGA CGACCGGTTC
ATGTACTGGT CCAACACCCC CGAGCACCGT ATCGACCGGT TTGACTTCGA TGCCGCCACC
GGAGCCATCG GCAAGCGCCA GCCCTGGGCG CATTTTGCCC GCAAGGAACC CGGCCAGCCC
TACGGCGGCC GCCCCGATGG CGCAGCGGTG GACCGCCAAG GCAACTACTG GGTGGCCATG
TACGAGGGCG CCTGCGTGCT GCAACTCGCG CCCACCGGCG CGGTATTGCA GCGCATCGCG
ACCCCGGTGC AATGCCCCAC CATGGTGTGC TTCGGCGGGG AAGATCTGCG CACGCTGTAC
ATCACCTCGG CCCGCGCGGG GCGGCCCGAG CAAGAGCGCA ATGCCAGCCC TGCGGCAGGC
TGCCTGTTCA GCACCCGGGT CGAAGTGCCG GGGCTGGCGG TCAACTTCTT CAAGCCATGA
 
Protein sequence
MQTLPLPPSE LGESPFWHPH EKRLYWCDIQ GFALHAWEPA TGRSWRWEMP AEPGCCAPAP 
DRHCVIGLRD GFHLLDTASG ALRCLAPLPA ARHDPRRLRL NDGRCDTAGR FWAGSMVTPR
TAPDAALWRL SAGAGGYRLE QMAGDNFTAN GLAFSPDDRF MYWSNTPEHR IDRFDFDAAT
GAIGKRQPWA HFARKEPGQP YGGRPDGAAV DRQGNYWVAM YEGACVLQLA PTGAVLQRIA
TPVQCPTMVC FGGEDLRTLY ITSARAGRPE QERNASPAAG CLFSTRVEVP GLAVNFFKP