Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2553 |
Symbol | |
ID | 4691300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2884132 |
End bp | 2885250 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639850319 |
Product | extracellular solute-binding protein |
Protein accession | YP_997316 |
Protein GI | 121609509 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000043545 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0689271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCGCG TTTGCCCATC ATCACCCCCC TCACCACCCC GTCACCACCC CCGAAAGATG CATCCCATGA CCAAGACCGT TAAACCCTGG CTGGCCGCTT GCGCCCTGGC TGCCGCCGTC GGCGCCGGCC ATGCCCAGGA ACCCGTGCTG AACCTCTACT CGGCCCGCCA CTACGCCACC GACGAGGCCC TGTACAGCGG CTTCACCAAG GCCACCGGCA TCAAGATCAA CCGCGTCGAC GCCGACGATG CCGGCATCCT GGCGCGCCTG AAGACCGAAG GCGCGGCCTC GCCTGCGGAC GTGATTTTGC TGGTCGATGC CGCCCGCCTG TACAAGGCGG AAGTCGATGG CCTGTTCCAG CCCATCGTGT CCAAGCTGCT GCTCGACGCC ATTCCCGCCC ACTTGCGCAG CAGCCCTGCG GCCGACGGCG GCATCTCCTG GTTTGGCCTG TCCACGCGCG CCCGGGTGAT CGTCTACAAC AAAACGCGCG TGCACAAGTC GCAGGTCGAT AGCTACGAAG CGCTGGCCGA TCCCGGGAAC AAGGGCCGGC TGTGCATCCG CTCCGGTTCG CACCCCTACA ACCTGAGCCT GTTCGGCGCC GTGACCGAGC ATCTGGGCGA ACAAAAGGCC GAGGCCTGGC TCAAGGGCCT GCTGGCCAAC CTGGCCCGCC CCCCCAAGGG TGGCGATACC GACCAAATCA AAGCCGTGGC CGCTGGTGAA TGCGATATCG CCGTGACCAA CAGCTACTAC CTGGCACGCC TGATGCGCTC CAGCAAGCCG GAAGACGTGG CCGTGGCCAA CAAGGTGGGC GTGGTGTTTC CCAACCAGGC ATCCTGGGGC ACGCACCTGA ACATCGCCGG CGGCGCGGTG GCCAGACATG CGAAAAACCA GGCCCATGCC ATCCGATTCC TGGAATACCT GGCCAGCCCC GAAGCCCAGA ACCACTTTGC CAACGGCAAT AACGAGTGGC CCGCCGCCAA GGGCGTGATC CTGGACAACC CGGCGCTCAG GGCCATGACC GGCGACCAGC CGTTCAAGAG CGAAACCATC GCCATCAGCG TCGTGGGCGC GAACATGGCC CGGGTGCAGC AGATGCTCGA CCGCGTGGGT TTTCCGTGA
|
Protein sequence | MIRVCPSSPP SPPRHHPRKM HPMTKTVKPW LAACALAAAV GAGHAQEPVL NLYSARHYAT DEALYSGFTK ATGIKINRVD ADDAGILARL KTEGAASPAD VILLVDAARL YKAEVDGLFQ PIVSKLLLDA IPAHLRSSPA ADGGISWFGL STRARVIVYN KTRVHKSQVD SYEALADPGN KGRLCIRSGS HPYNLSLFGA VTEHLGEQKA EAWLKGLLAN LARPPKGGDT DQIKAVAAGE CDIAVTNSYY LARLMRSSKP EDVAVANKVG VVFPNQASWG THLNIAGGAV ARHAKNQAHA IRFLEYLASP EAQNHFANGN NEWPAAKGVI LDNPALRAMT GDQPFKSETI AISVVGANMA RVQQMLDRVG FP
|
| |