Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2442 |
Symbol | |
ID | 4690383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 2777478 |
End bp | 2779382 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639850209 |
Product | ABC transporter related |
Protein accession | YP_997206 |
Protein GI | 121609399 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0403227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCGG TACCGATGGC GACCTCTTCG CGGCTCTCTG CGGCGCTGGC TTGCACCCGC GCGGCCTGGG CTCGGCTGCT GGGGGCCGTA GGGCCGCACG CCCCAGCCCT GCGACGCTGC CTTGCGGGGC TGGCCGCTGC CGCTGCCCTG CAGGGGCTGG CCCTTGCCTG CGTCTTGCCG CTGTTCACGG CGCTTTTCCC CTCGCCCGAC GCGGGCGCGG CGCTAGTGTC GCGTCACCGA TCAGATGTCG TAGGCTGCGC GCAGCCATCG GAGCGCAGCG CAAGGCGCAG CGCGCAGCCA ATACCGAGCG TATTGGCAAG CGATGCAACG CCGCGATGCG CTTCGATGGC CAGCGCAGAC CGACAGATGA CCGGTGACGC GACACTAGGT TGGCTTGTCG CCATGACGGC ACTGGCCGGT CTGGCCACGG CCCTGCGATG GCACGCGCAG GGCTTCGAAT ACGGCGGCCA GTTGGCCCGG GCCACGCACG ATCTGCGCCT GCGGCTGGGC GAGCAATTGC GCCGCATGCC GCTGGAGCGG CTGCGCGAGA AACGGTCCGG GGAGATGAAC GCGCTGCTGC TGGGCAATGT GGACGAGCAC CTGAATTACA CCGTGGCCAT CGCCAACCTC ATTCTGCTGG CCACCGCCGC GCCGCTGGCG CTCGCGCTGG CCGTGATGGT GTTCGACGCG CGGCTGGGCG CACTGCTGCT GGCGGTTTTC CCCGCGCTCT GGCTGCTCCA CCGCTGGCGC CGCCCGGCCC TGGCGCGCGG CATGCGCGAG CTGAACGAGG CGCATCGGCG CTGCCATGCC GACATCGTCG AATACACGCA GGGGCAGACT GCGCTGCGCG CGGCCTGCCA GGAGGGGGGG CGCGCGGCGA CGCTGTACGC GGGCTTCGAG CGCCTGCGGG AGATCCAGGC GGCCGCCCAC CGTCAGGGCG CCAGGCCATC CGTCGTGACC GCCAGCATCG TCGAGCTGGG CCTGCTGGGG ATCGTCGCCG CGGCGACCGG CTGGGTGGTG TCGGGCACGC TCCATCCCGC AGCGGTGGCG GCGCTCATGG TCATCACCGT GCGCCTGTCC GAGCCGATGG CGACACTGGT CGGCTACACC ACGGTGCTGG AGATGATGGA CGCCGCGCTG GAGCGGATCG AGGCGCTGCT GGCCATTCCC CCGCTGCCTT TGCACACGCC GCAGGCCGTG CCCGGGCACT TCGATGTCCG CTTCGAGGGC GTCGGCTTCC GGTACGCCGG TGCGCAGGAA AGTGCCCTCG CGGACTTTAC GGCGACGCTG CCGGCGCGGG CCATGACGGC GCTGGTGGGC TCGTCCGGCT CCGGCAAGAC CACCGTGGCC CGGCTGCTCC TGCGCCATGC CGACCCGCAG GCAGGGCACA TCGCGATCGG CGGCATCGAT ATCCGCCACA TGGCTCCAGA GGTGCTGAAC AGCCTGGTGT CGGTGGTGTT CCAGGACGTG CATCTGTTCG ACGACACGGT GCTGGCCAAC ATCCGCATGG CGCGCCCTGA CGCGGACGAC GATGCGGTCC GCGCCGCCGC CCGCGCCGCG CAGTGCCTGG ACTTCATCGA GCGCCTGCCG CAGGGCTGGA ACACCCGGCT GGGCGAGATC GGGGACCTGC TCTCCGGGGG CGAGCGCCAG CGGATCTCGA TCGCGCGAGC GCTGCTCAAG AATGCGCCCA TCGTGGTCCT GGACGAGCCT ACTGCCGCGC TGGACACCGA GAGCGAGCTG GCCGTGCAGC GGGCCATTGA CACCCTGGTG CTCGACAAGA CCGTGATCGT GATCGCGCAC CGCCTGTCCA CCATCGCCGG CGCCGACCGC ATTCTGGTGG TGGAGGGCGG CCGACTGGTG GAGCAGGGGC GGCACGACGA GTTGCTAGCG TACCGTAATG ATTGA
|
Protein sequence | MSAVPMATSS RLSAALACTR AAWARLLGAV GPHAPALRRC LAGLAAAAAL QGLALACVLP LFTALFPSPD AGAALVSRHR SDVVGCAQPS ERSARRSAQP IPSVLASDAT PRCASMASAD RQMTGDATLG WLVAMTALAG LATALRWHAQ GFEYGGQLAR ATHDLRLRLG EQLRRMPLER LREKRSGEMN ALLLGNVDEH LNYTVAIANL ILLATAAPLA LALAVMVFDA RLGALLLAVF PALWLLHRWR RPALARGMRE LNEAHRRCHA DIVEYTQGQT ALRAACQEGG RAATLYAGFE RLREIQAAAH RQGARPSVVT ASIVELGLLG IVAAATGWVV SGTLHPAAVA ALMVITVRLS EPMATLVGYT TVLEMMDAAL ERIEALLAIP PLPLHTPQAV PGHFDVRFEG VGFRYAGAQE SALADFTATL PARAMTALVG SSGSGKTTVA RLLLRHADPQ AGHIAIGGID IRHMAPEVLN SLVSVVFQDV HLFDDTVLAN IRMARPDADD DAVRAAARAA QCLDFIERLP QGWNTRLGEI GDLLSGGERQ RISIARALLK NAPIVVLDEP TAALDTESEL AVQRAIDTLV LDKTVIVIAH RLSTIAGADR ILVVEGGRLV EQGRHDELLA YRND
|
| |