Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2404 |
Symbol | |
ID | 4691313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2720063 |
End bp | 2720890 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639850171 |
Product | regulatory proteins, IclR |
Protein accession | YP_997168 |
Protein GI | 121609361 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.187611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCGA CGGATAAGGA CGCCGCCACC GCCGGCGCGC AAAGCGTGCG CCGCGCGCTG GCCGTGCTGC GCGTGCTCGC CACCGGCCAG GAGCGCGGCG TGCGCCTGAC CGATGTCGCG GCCCATACGG GCCTGAACCG CCCGACGGTG CACCGCATCC TGCGCGTGCT GGTGGAAGAA AGCGCGGTCG AGCAGGACCT GGCCACGCGC CGCTACCTGA TCGGCGGCGA AGTCTCCCTG CTGGGGCTGG CGCGCTCGGC ACGCTTTCCG ATCCGCGCCA TCGCCGAGCC GCACCTGCGC CACCTGAGCG AGAGCCTCGG CGACACCACC TTCCTGACCA TCCGCAACGG GGTCGATTCG GTATGCATCG ACCGCCGCCC GGGCAGCTTT TCGGTGAAGG TGTTGTCGAT CGAGATCGGC GCGCGGCGCC CGCTTGGCGT GGGCGTGAGT GGCCTGGTAC TGCTCGCCTC ACTGCAGCCC GAAGAAGCAG CGGAGGTGGT GCGGCGCAAT GCGCGTCGGC TGCAGGCGCT GCACATCGAT CCGGCCGAAC TGCTCGAACG CGCGCTGCGC ACGCGCGCGC AGGGATATGC CTACGCGCCG GTCGGCGTGG TGCCCGGCTC GCGCGCGGTG GCCGTGCCGG TGCGCATGGC GGACGGCCGC ACCGTCGCCG GGCTGGCCAG CGCGACCATC ACCGAGCGAC TGCCGGCTGA GCGCGTGCCC GTGGTGGTCG CACAGATGAA AGAGCAAGCC GAGCAGATCG CCGTGCAGGT GGCCGAACTC GCACGCCGCA AGAACGGCCA TCGAGGGAAC GGGCATGGGG AGCCCTGA
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Protein sequence | MAATDKDAAT AGAQSVRRAL AVLRVLATGQ ERGVRLTDVA AHTGLNRPTV HRILRVLVEE SAVEQDLATR RYLIGGEVSL LGLARSARFP IRAIAEPHLR HLSESLGDTT FLTIRNGVDS VCIDRRPGSF SVKVLSIEIG ARRPLGVGVS GLVLLASLQP EEAAEVVRRN ARRLQALHID PAELLERALR TRAQGYAYAP VGVVPGSRAV AVPVRMADGR TVAGLASATI TERLPAERVP VVVAQMKEQA EQIAVQVAEL ARRKNGHRGN GHGEP
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