| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2339 |
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| Symbol | |
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| ID | 4695294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 2643355 |
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| End bp | 2644659 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639850106 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_997104 |
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| Protein GI | 121609297 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.713722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACC TTGCCATCAC CGGCCTGCTG ATACTGTCGC TGTTCCTGAT CCTGGGCAGC
GGCGTATGGA TAGGGCTGAC CCTCTCGGGC GTGGCCTGGA TCGGCATGCA ACTGTTCTCG
TCGCGCCCCG CAGGCGACGC CATGGCCGTG ACGATCTGGG GCTCGGCATC GAGCTGGACC
CTCACCGCCT TGCCCCTGTT CATCTGGATG GGTGAAATCC TGTTCCGCAC CCGGCTGTCG
CAAGACATGT TCAAGGGGCT TGCGCCCTGG GTGCAGGCGC TGCCGGGTCG GCTGCTGCAC
ACCAACGTGG TCGGCTGCAC CATCTTTGCC GCCGTATCGG GCTCGAGCGC CGCCACCTGC
GCAACGATAG GCAAGATGAC ATTGCCCGAA CTGGCCCGCC GCGGCTACCC GGAACACATG
GTGGTCGGCA CCCTGGCCGG GGCCAGCACG CTGGGCCTGC TGATTCCGCC GTCGATCACG
ATGATCGTCT ACGGCGTGGC GGCCGAGGTC TCGATCTCGC AGTTGTTCAT TGCCGGCGTG
CTGCCCGGCA TCTTGCTGGC CAGCCTGTTC TCGGGCTACA TCATGCTCTG GTCGCTGCGG
CATCCGCAGC AGGTGCCGGC GGCCGACATG CGCATGAGCT TCATGCAAAA GCTGTCCGCA
TCGCGCAGCC TGATCCCGGT GGTGCTGCTG ATCACCAGCG TGCTCGGCTC CATCTACACC
GGCCTGGTCA CGGCCACCGA AGCGGCCGCC GTCGGGGTGG TGGGCGCGCT CGTGCTGTCG
AGCGTGCAGG GCTCGATGAA CTGGGGCACC TTCAAGCAAT CGCTGATGGG CGCCACGCGC
CTGTACTGCA TGATCGCGCT GATCATGGCG GGCGCGGCCT TCCTCACGCT GTCCATGGGC
TACATCGGGC TGCCCCGCCA CCTGGCGCAA TGGATTGCGT CGCTGGGCAT GAACCAGGCC
CAACTCATTG CCGCGCTGGC GCTCTTTTTC ATCGTGCTCG GCTGCTTTCT GGATGGCATC
TCGATGGTGG TGCTGACCAT GGGCGTGCTC ATGCCCACGG TGCAAAGCGC AGGCATCGAC
CCGATCTGGT TCGGCATCTT TATCGTGCTG GTGGTGGAGA TGGCGCAAAT CACGCCGCCG
ATTGGTTTCA ACCTGTTCGT GCTGCAAGGC ATGACGGGTC GCGAACTGCC CTGGATCGCC
CGGGTGGCCC TGCCGATGTT TCTGCTGATG TGCGTTGCCG TGGTGCTGAT CTATCTGTTC
CCCGGCATCG TGACCTGGCT GCCGCAGCAG ATGTCGGCCC GCTGA
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| Protein sequence | MSDLAITGLL ILSLFLILGS GVWIGLTLSG VAWIGMQLFS SRPAGDAMAV TIWGSASSWT
LTALPLFIWM GEILFRTRLS QDMFKGLAPW VQALPGRLLH TNVVGCTIFA AVSGSSAATC
ATIGKMTLPE LARRGYPEHM VVGTLAGAST LGLLIPPSIT MIVYGVAAEV SISQLFIAGV
LPGILLASLF SGYIMLWSLR HPQQVPAADM RMSFMQKLSA SRSLIPVVLL ITSVLGSIYT
GLVTATEAAA VGVVGALVLS SVQGSMNWGT FKQSLMGATR LYCMIALIMA GAAFLTLSMG
YIGLPRHLAQ WIASLGMNQA QLIAALALFF IVLGCFLDGI SMVVLTMGVL MPTVQSAGID
PIWFGIFIVL VVEMAQITPP IGFNLFVLQG MTGRELPWIA RVALPMFLLM CVAVVLIYLF
PGIVTWLPQQ MSAR
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