Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2301 |
Symbol | |
ID | 4694390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2610065 |
End bp | 2611057 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639850069 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_997067 |
Protein GI | 121609260 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.960939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCA ATTTGCTGAA ACCCAAGGCA ATCAATGTCG AGCAGCTTGG TCACCACCAT GCCAAGGTCG CACTGGAGCC GTTCGAGCGT GGCTATGGTC ATACGCTGGG CAACGCCATC CGGCGCGTGC TGCTCTCGTC GATGGTGGGT TACGCAGCGA CGGAAGTCAC CATCGCAGGC GTTTTGCACG AGTACTCGTC GATCGACGGG GTGCAAGAGG ACGTGGTCAA CATCCTGCTG AACCTCAAGG GAGTGGTGTT CAAGCTGCAC AACCGTGATG AAGTGACACT GAGCCTGCGC AAGGACGGCG AAGGGATGGT CACGGCGCGG GACATACAAA CCCCGCACGA CGTGGAAATC GTCAACCCGG ACCATGTGAT TGCCAACCTG TCGCAAGGCG GCAAGCTGGA CATGCAGATC AAGGTCGAAA AAGGCCGTGG CTACATGCCG GGCAACCTGC GCCGCTATGC AGACGAGGTG ACCAAGTCGA TTGGCCGCAT CGTTCTGGAT GCATCGTTCT CCCCGGTCAG GCGCGTGAGC TACACGGTGG AAAGCGCCCG CGTCGAACAG CGCACCGACT TGGACAAGCT GGTCGTCGAG ATCGAAACCA ATGGCGCCAT CACGGCCGAA GACGCAGTGC GGGCATCGGC CAAGATCCTG GTGGAACAAC TGGCGGTGTT CGCGCAGCTC GAAGGTGGCG AGCTGGCTGC GTTCGACGCA CCGACCGGGC CACGCGGCAA TGCCAGCTTC GATCCGATCC TGCTGCGCCC GGTCGACGAA CTGGAGCTGA CCGTGCGCTC GGCCAACTGC CTGAAGGCCG AAAACATCTA CTACATCGGT GACCTGATAC AGCGCACCGA AAACGAACTG CTCAAGACGC CCAACCTGGG CCGCAAGTCG CTCAATGAGA TCAAGGAAGT GCTTGCCTCG CGTGGCCTCA CGCTGGGCAT GAAGCTCGAA AACTGGCCAC CCGCTGGCCT GGACAAACGT TAA
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Protein sequence | MQTNLLKPKA INVEQLGHHH AKVALEPFER GYGHTLGNAI RRVLLSSMVG YAATEVTIAG VLHEYSSIDG VQEDVVNILL NLKGVVFKLH NRDEVTLSLR KDGEGMVTAR DIQTPHDVEI VNPDHVIANL SQGGKLDMQI KVEKGRGYMP GNLRRYADEV TKSIGRIVLD ASFSPVRRVS YTVESARVEQ RTDLDKLVVE IETNGAITAE DAVRASAKIL VEQLAVFAQL EGGELAAFDA PTGPRGNASF DPILLRPVDE LELTVRSANC LKAENIYYIG DLIQRTENEL LKTPNLGRKS LNEIKEVLAS RGLTLGMKLE NWPPAGLDKR
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