Gene Veis_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2287 
Symbol 
ID4694024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2592103 
End bp2595183 
Gene Length3081 bp 
Protein Length1026 aa 
Translation table11 
GC content67% 
IMG OID639850054 
Productacriflavin resistance protein 
Protein accessionYP_997053 
Protein GI121609246 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0362502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.921003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCTT CGCGTCCGTT CATCGACCGG CCCGTGGCCA CTGCGCTGCT GATGCTGGCG 
ATCGTGCTGG CCGGGTTGCT GGGTTTGCGT TTGTTGCCGT TATCGGCCTT GCCCGAGGTG
GATTACCCCA CCATCGAGGT GCAGACCCTG TACCCGGGCG CCAGCCCCGA GGTGATGGGC
CGCACGGTGA CTGCGCCGCT GGAGCGCCAG TTGGGCCAGA TGTCGGGGCT TGCGCGCATG
GCTTCGAGCA GCGGTGCGGG CCTGTCGATC ATCACGCTGC AGTTCGGTCT GGGGCTGGCG
CTGGATGTGG CCGAGCAGCA AGTGCAGGCG GCCATCAATG CCGGCAGCGC GTTGCTGCCC
GCCGACCTGC CGGCGCCGCC GGTGTACGCC AAGGTCAACC CTGCCGACGC CCCGGTGTTG
ACGCTGGCCA TCAGTTCGGA CCGGATGCCG CTGACCGAGG TGCAGAACCT GGTGAACACG
CGCCTGGCGC AGAAGATCAG CCAGGTCAGT GGCGTCGGTC GGGTGTCGCT GTCCGGCGGG
CAGCGCCCTG CGGTGCGCAT ACAGGCCGAT ACCCGGGCGC TGGCCTCGTA TGGCATGGGC
CTGGATACTC TGCGCACGGC CATCACCTCG GCCCATGCCA ACAGTGCCAA GGGCAGTTTC
GACGGGCCGC AGCGGGCCTA CACCATCGAT GCCAATGACC AGTTGCTGAC GGTGCGGGAT
TACCAGGACC TGATCCTGTC CTGGCGCAAC GGCGCTGCGG TGCGCCTGCG GGATGTGGCG
CGGGTGATCG ACGGCGCCGA GAACGACCGC CTGGGCGCCT GGGCCAACGA GACCCCGGCC
ATCATCCTGG ATGTGCAGCG CCAGCCGGGC GCGAACGTGA TTGCCACGGT CGATCGCATC
CGGCAACTGC TGCCCGAGTT GCAGGCCGGC CTGCCCGCAA CGCTCAAAGT CCAGTTGCTG
TCGGACCGCA CCCGGGGCAT CCGGGCATCG GTGACGCATG TGGCCATCGA ACTGGCCCTG
GCCGTGCTGA TGGTGGTGCT GGTGATCTTT TTCTTCCTGC ACAGCCTGCG TGCCACGGTG
ATCGCCAGTC TGGCGGTGCC GATCTCGCTG ATCGGCACCT GCGGCGTGAT GTATCTGCTC
GGTTACAGCC TGAACAACCT GAGCCTGATG GCGCTGACCA TTGCCACCGG TTTCGTGGTC
GACGATGCCA TCGTGATGCT GGAGAACATC ACGCGCTATC TGCACGAGGG CGAGACACCG
TTGCGGGCGG CGATCAAGGG CGCCACGCAG ATCGGTTTTA CGATCATCTC GTTGACGCTG
TCGCTGATTG CCGTGCTCAT CCCGCTGCTG TTCATGCGCG ATGTGCTGGG GCGGCTGTTT
CGGGAGTTTG CGGTCACGCT GGCCATCACC ATCCTGATCT CGGCGGTGGT GTCGCTCACG
CTGGTGCCGA TGATGGCGGC GCGCTGGTTG CGCCCGGAAC CCGAGGGCGG CAGCAAGGGC
TGGTTCGAGC GCGGGTTCGG GCGCGTCGTC GCGGGCTATG ACCGCTCGCT GCAATGGGTG
CTGCGCCACC AGGGCGCCAC GCTGCTGGTG GCCCTGCTGA CGCTGGCGTT GACGGCCTGG
CTGTACCTGG TGGTTCCCAA GGGGCTGTTT CCGACGCAAG ACACCGGGCA GTTGCAGGCC
CGCATCGAGG CCGCGCAGGA TGTGTCCTAC GCCCGCTTGA GCCAATTGCA GCAGGCCGCC
GCGCGCGCCA TCTTGCAGGA CCCGGACGTG CAGTCGCTCA GTTCCTTCGT CGGGGTCGAT
GGCGCCAACA ACACCTTGCC CAACACCGGG CGCATGTTGA TCAACCTGAA GGCCGAGCGC
GATGCGCAGC CGGTCATCAT CGGGCGGTTG CGCGAGCGTG TGCAGGCGGT GGCCGGTGTC
AAGCTGTATT TGCAGCCCAC GCAAGACCTG ATCATCGACG CCCAAACCGG GCCTACCGAA
TACCGTGCAT CCATCGGCGG TGTCGATGCA CAGCAGGTCA ACGGCTGGAC CCGCAAACTG
GTGCAGCGCC TGGGCAGCGA GCCCATGGTG CGCAACGCCA GCACCGATGC CGGCGCCCAG
GGGCTGTCGG CCTTCGTCGA CATCGACCGC AACACCGCGT CGCGCCTTTC GGTCAGTGCC
AGTGCGGTCG ATGACGCGCT CTACAGCGCC CTGGGCCAGC GCATCGTTTC CACCATCTTC
ACCGAAACCA ACCAGTACCG GGTGATCCTG GAGGCGCAGC CCGAGCAACT GGGCAGCACC
GAAGCGCTGG GCACGCTGCA ACTGCGCACC GGCTCGGGCG GGTCCACGCC GCTGGCCGCC
GTGGCCAATA TCCGGGAACG ATTGGTGCCG CTGCAACTGA CCCGTGTGGC CCAGTATCCG
GCGGCGACGC TGGGGTTTGA CAAGGCGCCG GGCCAGTCCC TGGGCAGCGC GGTCGATGCG
ATCCGCGCCG CCGCCCGGGA GATCGGCATA CCGCAGGGCC TGGACATGGA GTTCCTGGGC
GCGGCCGGGG CTTACGAGAA GTCGCTGAGC AGCCAGTTGT GGCTCATCCT GGCGGCCATG
GTCTGCGTCT ACATCGTGCT CGGGGTGCTG TATGAGAGCT ACATCCACCC GGTGACCATC
CTCTCGACGC TGCCATCGGC CGGGATCGGG GCCTTGCTGG CGTTGATGCT GGCGGGCCAG
GACCTGGGGG TGATCGGGGT CATCGGAATC ATCTTGCTGA TCGGCATCGT CAAGAAGAAC
GCCATCATGA TGATCGACTT CGCCATCGAT GCGCAGCGCA AGCAGAACCT GCCGCCGCAA
CAGGCCATCC ACCAGGCTGC CTTGCTGCGG TTGCGGCCCA TCCTGATGAC CACGCTGGCG
GCATTGTTTG CCGCATTGCC GCTGATATCG AACTGGGGCG ATGGCGCCGA ACTGCGCCGC
CCGCTGGGGC TGGCCATCTT TGGCGGGCTG ATCCTGAGCC AGATGCTCAC ACTGTTCACC
GTTCCGGTGA TCTATCTGGC GTTTGAGCGC CTGGGTCGCA GTCGGGGCCG GGCCGCAGCG
CCGCAGGAGC AGGCCCCGTG A
 
Protein sequence
MSPSRPFIDR PVATALLMLA IVLAGLLGLR LLPLSALPEV DYPTIEVQTL YPGASPEVMG 
RTVTAPLERQ LGQMSGLARM ASSSGAGLSI ITLQFGLGLA LDVAEQQVQA AINAGSALLP
ADLPAPPVYA KVNPADAPVL TLAISSDRMP LTEVQNLVNT RLAQKISQVS GVGRVSLSGG
QRPAVRIQAD TRALASYGMG LDTLRTAITS AHANSAKGSF DGPQRAYTID ANDQLLTVRD
YQDLILSWRN GAAVRLRDVA RVIDGAENDR LGAWANETPA IILDVQRQPG ANVIATVDRI
RQLLPELQAG LPATLKVQLL SDRTRGIRAS VTHVAIELAL AVLMVVLVIF FFLHSLRATV
IASLAVPISL IGTCGVMYLL GYSLNNLSLM ALTIATGFVV DDAIVMLENI TRYLHEGETP
LRAAIKGATQ IGFTIISLTL SLIAVLIPLL FMRDVLGRLF REFAVTLAIT ILISAVVSLT
LVPMMAARWL RPEPEGGSKG WFERGFGRVV AGYDRSLQWV LRHQGATLLV ALLTLALTAW
LYLVVPKGLF PTQDTGQLQA RIEAAQDVSY ARLSQLQQAA ARAILQDPDV QSLSSFVGVD
GANNTLPNTG RMLINLKAER DAQPVIIGRL RERVQAVAGV KLYLQPTQDL IIDAQTGPTE
YRASIGGVDA QQVNGWTRKL VQRLGSEPMV RNASTDAGAQ GLSAFVDIDR NTASRLSVSA
SAVDDALYSA LGQRIVSTIF TETNQYRVIL EAQPEQLGST EALGTLQLRT GSGGSTPLAA
VANIRERLVP LQLTRVAQYP AATLGFDKAP GQSLGSAVDA IRAAAREIGI PQGLDMEFLG
AAGAYEKSLS SQLWLILAAM VCVYIVLGVL YESYIHPVTI LSTLPSAGIG ALLALMLAGQ
DLGVIGVIGI ILLIGIVKKN AIMMIDFAID AQRKQNLPPQ QAIHQAALLR LRPILMTTLA
ALFAALPLIS NWGDGAELRR PLGLAIFGGL ILSQMLTLFT VPVIYLAFER LGRSRGRAAA
PQEQAP