| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2278 |
|---|
| Symbol | |
|---|
| ID | 4694626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2583576 |
|---|
| End bp | 2584922 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639850045 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_997044 |
|---|
| Protein GI | 121609237 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCAG AAAATCATCG GCAATGGTCT GCCACGGCCC GCACAGCGAT TGCGCTGGGT
GCATGGCTGC TTGCCGCAGT GGCCGGCACC GGTGTTCAGG CGCAAGAGTT CAAAGGTTAT
ACGCTGAAAG TAAAGCTGAT CGGTGGCACA CAGTATGAGC CGCTGTACGC CATCATCCCG
GAATGGGAAA AGAAAACCGG TGCCAGGGTC GAAATCCTGT CACGCAAAAA CCACTTCGAA
TTGGACAAGG AGATCAAGCA GGACATTGCT GCCCGCAAGA TCGACTACTG TGTGGCATCA
AACCATACCA GTTTCTCACC ACAATATGGT GATATCTATC GTGATCTGCA AAAAGCATTG
CCTGCCACCT GGGTGAGTCA ATTCGGGAAA CTGGTCCTTG AGCATTCCAC CGTGGCTGGT
TCCCTGGTGC TGTTGCCACG CCATTCCGAT GTCAGCGAAC TGTATTACAA TAAAAAATTC
TATGACAACA CCGAAAACAA GGCCGCCTAC AAAACCAGAT TTGGCAAAGA GTTACTGGTT
CCCGATACCT GGACAGAATT TGCACGGCAG GCAAAGTTCT TCAGCAAGCC GCCCTCGGTC
TATGGCACCC AGTTCCCCGG CAAGGATGAG GCCATTACCG GGCGTTTCTA TGAAATGCTC
GTCGCAGAAG GCGGTGCGTT GTTCGACAAG GACTGGCGCC CGACATTCAA TTCTGCGGTG
GGTGAGCGTG CCCTGAATTT CTTTGTCGAC CTTTACAAGT CCGGAGCCGT GCCCAAGGGT
GTGCCCAACT ATATTTGGGA CGACCTGGGC CAGGGTTTTG CCAGCGGCAA TATCGCGCTG
AATCTGGATT GGGGTGGTTG GGCCGGCTTT TTCAACGACC CCAAAAACTC CAGGATCGCC
GGCAACGTTG GCATTGCGCG TGCACCCAGG GGTTCTTCGG GAAAACGCAC CGGTTGGGCC
GGGTCACATG GTTTTTCCAT TACCAAGGCT TGTGATAATC CAAAGGCCGC AGCCAGTTTG
GTCATGGCCC TGACAAGTCT GGAGGCCCAG ATGATCGAGG CGCGCAATGG CATGATGCCA
ACCCGCATGG ATGCACAAAA GCAGGCCGCA GGGGAATTTG CAAAAAAGGG CGACAAGTAC
ATGCTGGAAG TATTTCAGAC CTTTGCCAAA GGCATGGCCG AGGATGCATT TACACCACCG
CTGATCCCGG AGTGGATCGA AGCCTCCAAC GCCATTTGGC CTGAGTTGCA AAAAGCGCTG
ATCGGCGAGA AAACCGGCAA GCAGGCGCTG GATGACGCAG CCAACAAAGT ATTGGCGATC
ATGCAGGATG CCGGTCGGGT GAGATAG
|
|---|
| Protein sequence | MKSENHRQWS ATARTAIALG AWLLAAVAGT GVQAQEFKGY TLKVKLIGGT QYEPLYAIIP
EWEKKTGARV EILSRKNHFE LDKEIKQDIA ARKIDYCVAS NHTSFSPQYG DIYRDLQKAL
PATWVSQFGK LVLEHSTVAG SLVLLPRHSD VSELYYNKKF YDNTENKAAY KTRFGKELLV
PDTWTEFARQ AKFFSKPPSV YGTQFPGKDE AITGRFYEML VAEGGALFDK DWRPTFNSAV
GERALNFFVD LYKSGAVPKG VPNYIWDDLG QGFASGNIAL NLDWGGWAGF FNDPKNSRIA
GNVGIARAPR GSSGKRTGWA GSHGFSITKA CDNPKAAASL VMALTSLEAQ MIEARNGMMP
TRMDAQKQAA GEFAKKGDKY MLEVFQTFAK GMAEDAFTPP LIPEWIEASN AIWPELQKAL
IGEKTGKQAL DDAANKVLAI MQDAGRVR
|
|---|
| |