| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2125 |
|---|
| Symbol | |
|---|
| ID | 4692854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2415010 |
|---|
| End bp | 2417307 |
|---|
| Gene Length | 2298 bp |
|---|
| Protein Length | 765 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639849887 |
|---|
| Product | Rieske (2Fe-2S) domain-containing protein |
|---|
| Protein accession | YP_996891 |
|---|
| Protein GI | 121609084 |
|---|
| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
[COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[TIGR02377] Rieske [2Fe-2S] domain protein, MocE subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.517485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.766307 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAG ACAGCAGTTG CGGCGCGGCC CCTGCGCGCT ATCCCGACTA CTCCCTGACC
GGGCTGAATG CCAGGCTGGC CATCGAACGG GGTCTGGCCG AAGCCCAGTG GTACCAAAGC
CCGGTCGCGC GCGATCGGCT GCGCGCACTG CTCGAACGCC GCGACGGCCC GGCCCTGCGC
GACACCATGC TGTGGTTCGC CCTGTTGTTG CTGACCGCCT GGGCCAGCCT GGCGTTGTGG
GGCTCCTGGT GGGCGCTGCT GCCCTACATG GCGTATGCGG TGCTGTACGC CACGGCCTCG
GATTCGCGCT GGCATGAAAC CAGCCACGGC ACAGCGTTCA AGACCGACTG GATGAACGAT
GCGCTGTACG AGATCGCCTC TTTCATGGTC ATGCGCGAGT CGGTGGTCTG GCGCTGGAGC
CACAACCGCC ACCACAGCGA CACGCTGATC GTCGGGCGGG ACCCGGAAAT CCAGGTCACG
CGCCCGCCCG ACCTGCGCGC GCTGTGCCTG AGCGTTTTCA ACATCGGCAC CTACCGCAGC
TACTTTCCCA GCCTGCTGCG CCACGCCGGC GGGCAGATGA CGGACGCGGA AAAGACCTTC
ATTCCGGCCA GCGAATTTCC CAAGGCGTAC CGCAACGCCC GCATCGTGCT GGCCATCCAT
GGCGCCACTG TGCTGGCCGC GCTGCTGCTG CAAAGCTGGG GGCCGATCTT CCTGATCATC
CTGCCGCACC TGTTCGGCAA CTGGCTGATG ATCGTGCACA ACACCACGCA ACACGCCGGG
CTGGCAGAAG ACACGCTCGA CCACAGGCTC AACTGCCGCA CGGTCTACAT GAATCCGCTG
AGCCGCTTCA TCTACTGGAA CATGAACTAC CACGTAGAGC ACCACCAGTA CCCGCTGGTC
CCGTACCACG CATTGCCGCG TCTGCACGAG CTGATCAAGG ACGACTGCCC GCCGCCATAC
CGCTCGATCG CGCAGGCCTG GCGCGAAATA CTGCCGGCCG TGCTGCGCCA GACCAAAGAC
CCCGACTACC ATGTCCGGCG GCCGCTGCCC GCCGCGCCAG CGCCCAAGCC GGCAGAGCCG
CCGCCGGGCT GCCGCAGCAC AGGCCCGGCC GATGCCCAGG GCTGGGTGGA TGCGGGGGCT
GCGTCCGACC TGCGCCGGGC CGAAGCGCGG CGCTTCGACC ACGACAGAAA AACCTACGCC
CTGGTGCGCA CCGACAGCGG CGCGCTGTAT GCCACCGACG GCATTTGCAC CCATGGCAAC
AACCACTTGG CCGACGGCTT GGTCAAGGGC AGCGTCATCG AATGCCCCAA GCACAATGGC
CGCTTCAACC TGACCGACGG CTCGCCCGCG CGCGCGCCGG TCTGCCGGGG CCTGGCCACC
TATCCGCTGC AAGAGCGGGC CGGCCGCCTG TGCCTGAATG TGCTGCAAGC CGGCGGCGCC
GGTGCGCGCA AGCCCGGCAG CCATGCGCTG CGGGTGTTGG GCAGCCGCCA TGTCGCCACC
TTCATCAAGG AGTTGGTATT GGAGCCCGTC GATCCCGCGC AGAGCCTGGC CTTCGTCCCC
GGGGATTACC TGCAACTGGA CATCCCCGCC TATGGCGAGA TTGCGCTGCG CGACCTCGAC
GTTCCCGCGC CCTACGCGCA AGCCTGGAAA GAGCAGGGCC TGTTCGATCT GGTGGCACGG
CACCAGGAGC CTGCTGCCGC CAGGCGCAAC AACTACTCGC TGGCCAGCAA CGCCGCACTG
GAGCGCCCGC TGCGCCTGAA TGTGCGCATC GCCACACCGC CTGCCGGCCA GGACTGCCCG
GTGGGCATAG GCTCGGCCTA CATGTTTGCG CTCAAGCCGG GCGACCAGGT CACGGCCATC
GGCCCGTTTG GCGACTTTCA CATCAAGCCC ACCCGGCGCG AGATGGTCTA CATCGGCGGG
GGCGCCGGCA TGGCGCCGCT GCGGGCGCAT CTGTCGCATC TGCTGGAGAC GGAAAACAGC
GCGCGCAAAA TCAGCTTCTG GTACGGCGCC CGCTCGCGCC AAGAGCTGTT TTATGACGAT
CTGTTCGGCG CGCTGGCGCA GAAGCACAGC AACTTCAGCT TTCACCTGGC CCTGTCGGCC
CCGCTGGCGC AAGACGCATG GACGGGCCTG ACCGGGCCTG TCGATCAGGT GGTGTTGCAG
CAATACCTGC GCACCCACCC CGACCCCCGG GCCTGTGAAT ACTATCTGTG CGGCCCCCCG
GCGATGGTCC GGGCCTGCTG CGGGATGCTC GGGGCGCTGG ATGTGCCCGG GCAGCAGATC
GCCTATGACG AGTTTTGA
|
|---|
| Protein sequence | MSTDSSCGAA PARYPDYSLT GLNARLAIER GLAEAQWYQS PVARDRLRAL LERRDGPALR
DTMLWFALLL LTAWASLALW GSWWALLPYM AYAVLYATAS DSRWHETSHG TAFKTDWMND
ALYEIASFMV MRESVVWRWS HNRHHSDTLI VGRDPEIQVT RPPDLRALCL SVFNIGTYRS
YFPSLLRHAG GQMTDAEKTF IPASEFPKAY RNARIVLAIH GATVLAALLL QSWGPIFLII
LPHLFGNWLM IVHNTTQHAG LAEDTLDHRL NCRTVYMNPL SRFIYWNMNY HVEHHQYPLV
PYHALPRLHE LIKDDCPPPY RSIAQAWREI LPAVLRQTKD PDYHVRRPLP AAPAPKPAEP
PPGCRSTGPA DAQGWVDAGA ASDLRRAEAR RFDHDRKTYA LVRTDSGALY ATDGICTHGN
NHLADGLVKG SVIECPKHNG RFNLTDGSPA RAPVCRGLAT YPLQERAGRL CLNVLQAGGA
GARKPGSHAL RVLGSRHVAT FIKELVLEPV DPAQSLAFVP GDYLQLDIPA YGEIALRDLD
VPAPYAQAWK EQGLFDLVAR HQEPAAARRN NYSLASNAAL ERPLRLNVRI ATPPAGQDCP
VGIGSAYMFA LKPGDQVTAI GPFGDFHIKP TRREMVYIGG GAGMAPLRAH LSHLLETENS
ARKISFWYGA RSRQELFYDD LFGALAQKHS NFSFHLALSA PLAQDAWTGL TGPVDQVVLQ
QYLRTHPDPR ACEYYLCGPP AMVRACCGML GALDVPGQQI AYDEF
|
|---|
| |